[QE-users] NEB unexpected crash

Mauro Sgroi maurofrancesco.sgroi at gmail.com
Tue Sep 21 11:51:08 CEST 2021


Dear Carlo,
Thanks a lot!
This should not happen because I'm using a queue batch system based on PBS.
So normally if I close the terminal the jobs continue to run smoothly.
Ciao,
Mauro.

Il giorno mar 21 set 2021 alle ore 10:31 Carlo Nervi <carlo.nervi at unito.it>
ha scritto:

> Dear Mauro,
> sometimes the way in which remote shell behave could stop the child
> processes.
> If you are running programs over SSH and if the connection drops, the
> session will be terminated, and all the executed processes will stop.
> To avoid that you may use the *nohup *(No Hang Up) command.
>
> In my system, for example, I can avoid the stopping of the processes by
> running normally my commands in background (&) and then exiting the shell.
> This guarantee (according to my system settings) that the child processes
> will be stopped.
> HTH,
> Carlo
>
>
> Il giorno mar 21 set 2021 alle ore 09:47 Mauro Sgroi <
> maurofrancesco.sgroi at gmail.com> ha scritto:
>
>> Dear Paolo,
>> all the 3 conditions you are reporting should not be the case.
>> I'm going to investigate with our HPC manager.
>> Best regards,
>> Mauro.
>>
>> Il giorno mar 21 set 2021 alle ore 08:56 Paolo Giannozzi <
>> p.giannozzi at gmail.com> ha scritto:
>>
>>> On Mon, Sep 20, 2021 at 5:52 PM Mauro Sgroi <
>>> maurofrancesco.sgroi at gmail.com> wrote:
>>>
>>>>
>>>> What does " Program stopped by user request"  mean?
>>>>
>>>
>>> it means one of the following cases:
>>> - the time limit specified in input has been reached
>>> - a file $prefix.EXIT or $prefix.save/EXIT or something like that has
>>> been detected
>>> - signal USR1 has been sent to the process (only if compiled with a
>>> specific preprocessing option)
>>>
>>> Is there a way to fix this behaviour?
>>>>
>>>
>>> there is nothing to be fixed: one should figure out which of the three
>>> cases mentioned above has occurred
>>>
>>> Paolo
>>>
>>>
>>>> Thanks a lot and best regards,
>>>> Mauro Sgroi.
>>>> _______________________________________________
>>>> Quantum ESPRESSO is supported by MaX (www.max-centre.eu)
>>>> users mailing list users at lists.quantum-espresso.org
>>>> https://lists.quantum-espresso.org/mailman/listinfo/users
>>>
>>>
>>>
>>> --
>>> Paolo Giannozzi, Dip. Scienze Matematiche Informatiche e Fisiche,
>>> Univ. Udine, via delle Scienze 206, 33100 Udine, Italy
>>> Phone +39-0432-558216, fax +39-0432-558222
>>>
>>> _______________________________________________
>>> Quantum ESPRESSO is supported by MaX (www.max-centre.eu)
>>> users mailing list users at lists.quantum-espresso.org
>>> https://lists.quantum-espresso.org/mailman/listinfo/users
>>
>> _______________________________________________
>> Quantum ESPRESSO is supported by MaX (www.max-centre.eu)
>> users mailing list users at lists.quantum-espresso.org
>> https://lists.quantum-espresso.org/mailman/listinfo/users
>
>
>
> --
>
> ------------------------------------------------------------
> Prof. Carlo Nervi carlo.nervi at unito.it  Tel:+39 0116707507/8
> Fax: +39 0116707855      -      Dipartimento di Chimica, via
> P. Giuria 7, 10125 Torino, Italy.    http://lem.ch.unito.it/
>
> *ICCC2020 has been postponed at 2022*
>
> ICCC 2022 28 August - 2 September 2022, Rimini, Italy: http://www.iccc2020.com
> International Conference on Coordination Chemistry (ICCC 2022)
>
> _______________________________________________
> Quantum ESPRESSO is supported by MaX (www.max-centre.eu)
> users mailing list users at lists.quantum-espresso.org
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