[QE-users] QE-6.5 with hdf5 library
rekha sharma
rekha1997jpr at gmail.com
Fri Nov 20 03:24:37 CET 2020
This is in addition to my previous mail.
QE-6.6 is recognising hdf5 lib but qe-6.5 does not.
On Fri, Nov 20, 2020 at 11:06 AM rekha sharma <rekha1997jpr at gmail.com>
wrote:
> Dear Sir
> I have recompiled the hdf5 with --enable-fortran
> the bin dir is having h5cc and when I execute"h5cc -show myprog.c", it
> prints
>
> mpiicc myprog.c -L/home/rekha/soft/hdf5/lib
> /home/rekha/soft/hdf5/lib/libhdf5_hl.a /home/rekha/soft/hdf5/lib/libhdf5.a
> -lz -ldl -lm -Wl,-rpath -Wl,/home/rekha/soft/hdf5/lib
>
> but still I do not see any hdf5 flag in my quantum espresso make.sys file.
>
> Can I update make.sys manually? but then how do I know that QE would be
> compiled with hdf5?
>
> Thank you very much
> Rekha
>
>
> On Thu, Nov 19, 2020 at 3:36 AM rekha sharma <rekha1997jpr at gmail.com>
> wrote:
>
>> Dear Sir
>> I do not see any -D__HDF5 in my make.inc
>> Yes, I have the directory
>> /home/rekha/soft/hdf5/bin
>> and in the bin dir I have
>> gif2h5 h52gif h5cc h5clear h5copy h5debug h5diff h5dump
>> h5format_convert h5import h5jam h5ls h5mkgrp h5perf_serial
>> h5redeploy h5repack h5repart h5stat h5unjam h5watch
>> I have defined the path of hdf5 in bashrc
>> export PATH=/home/rekha/soft/hdf5/bin:$PATH
>>
>> h5fc –show is not working.
>>
>> What should I do?
>>
>>
>>
>> On Wed, Nov 18, 2020 at 11:01 PM rekha sharma <rekha1997jpr at gmail.com>
>> wrote:
>>
>>> Dear Sir
>>> Thank you very much.
>>> Still I do not see any changes in my make.inc file.
>>>
>>> I see below only
>>> DFLAGS = -D__DFTI -D__MPI
>>> How can I know that the QE has been compiled with hdf5 or not?
>>> Thank you
>>>
>>> On Wed, Nov 18, 2020 at 10:12 PM rekha sharma <rekha1997jpr at gmail.com>
>>> wrote:
>>>
>>>> Dear Expert Quantum Espresso Users
>>>> I wanted to compile QE version 6.5 with hdf5 but I do not see any hdf
>>>> option make.inc after ./configure option with below options
>>>> --with-hdf5-libs=-L/home/rekha/soft/hdf5/lib
>>>> --with-hdf5-include=/home/rekha/soft/hdf5/include
>>>>
>>>> Can you please tell me how to install qe-6.5 with hdf5?
>>>>
>>>> Thank you very much
>>>>
>>>> --
>>>>
>>>>
>>>>
>>>>
>>>> Best wishes
>>>>
>>>> Ms. Rekha
>>>> Teaching Assistant,
>>>> Department of Physics
>>>> RK college, Jaipur, India
>>>> Mob.: +11 91-95 790 71 697
>>>> Email: rekha1997jpr at gmail.com
>>>>
>>>
>>>
>>> --
>>>
>>>
>>>
>>>
>>> Best wishes
>>>
>>> Ms. Rekha
>>> Teaching Assistant,
>>> Department of Physics
>>> RK college, Jaipur, India
>>> Mob.: +11 91-95 790 71 697
>>> Email: rekha1997jpr at gmail.com
>>>
>>
>>
>> --
>>
>>
>>
>>
>> Best wishes
>>
>> Ms. Rekha
>> Teaching Assistant,
>> Department of Physics
>> RK college, Jaipur, India
>> Mob.: +11 91-95 790 71 697
>> Email: rekha1997jpr at gmail.com
>>
>
>
> --
>
>
>
>
> Best wishes
>
> Ms. Rekha
> Teaching Assistant,
> Department of Physics
> RK college, Jaipur, India
> Mob.: +11 91-95 790 71 697
> Email: rekha1997jpr at gmail.com
>
--
Best wishes
Ms. Rekha
Teaching Assistant,
Department of Physics
RK college, Jaipur, India
Mob.: +11 91-95 790 71 697
Email: rekha1997jpr at gmail.com
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