[QE-users] Keep the symmetry during a calculation
Giuseppe Mattioli
giuseppe.mattioli at ism.cnr.it
Wed Sep 26 14:32:53 CEST 2018
Dear Carina
In the case of a simple lattice such as a cubic box full of water
molecules plus one solvated ion (no symmetry), you can try to do it
yourself: shrink isotropically the coordinates, step by step, and plot
an E/V curve to find a minimum. A parabolic fit is often a quick and
dirty way to have a reasonable (i.e. not so stressed) box.
I suppose that there is no simple way otherwise to do what you need.
HTH
Giuseppe
Carina Backtorp <carinabacktorp at hotmail.com> ha scritto:
> Hi!
>
> Thank you for the explanation.
> I understand it as although I have given ibrav=1 as an input for the
> vc-relax calculation, Quantum Espresso may find that the crystal
> does not have ibrav=1 symmetry. Is that correct?
> As an example, if one places ONE water molecule in a large cubic
> box and runs a vc-relax calculation in QE with ibrav = 1, i.e. cubic
> symmetry, then
> QE does a symmetry analysis concluding that the crystal symmetry is
> not ibrav 1 and therefore does the calculation with the correct
> symmetry.
>
> If so, is there a key word in QE that I can include into the input
> file so that QE gives the obtained corrected symmetry in the output
> file?
>
> Also, is it possible to give QE a constraint in the input file so
> that it keeps the symmetry that was given? For example: even if the
> crystal structure does not have the cubic symmetry according to QE,
> can one still keep all three box lengths equal during a vc-relax
> calculation?
>
> Thank you for all help!
> Kind regards,
> Carina
>
> ________________________________
> From: Paolo Giannozzi <p.giannozzi at gmail.com>
> Sent: Wednesday, September 19, 2018 3:44 PM
> To: Quantum Espresso users Forum
> Cc: Carina Backtorp
> Subject: Re: [QE-users] Keep the symmetry during a calculation
>
> On Sat, Sep 15, 2018 at 10:09 AM, Carina Backtorp
> <carinabacktorp at hotmail.com<mailto:carinabacktorp at hotmail.com>> wrote:
>
> 1) When doing an vc-relax calculation in espresso, I expected that
> once the symmetry was given (ibrav=1) espresso should keep the
> symmetry during all the calculation
>
> it does. Note however that the symmetry of the lattice is just part
> of the story. QE finds the starting symmetry of the crystal, and
> this is what is kept during the run (although occasionally,
> numerical noise and poor convergence may lead to the loss of the
> original symmetry). If the starting symmetry is not cubic, the final
> cell may lose its original cubic aspect. Also note that QE uses its
> own criteria for symmetry, that may differ from criteria used by
> other codes, so something that QE deems cubic may be classified as
> orthorhombic by a pickier code
>
> Paolo
>
>
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>
> --
> Paolo Giannozzi, Dip. Scienze Matematiche Informatiche e Fisiche,
> Univ. Udine, via delle Scienze 208, 33100 Udine, Italy
> Phone +39-0432-558216, fax +39-0432-558222
GIUSEPPE MATTIOLI
CNR - ISTITUTO DI STRUTTURA DELLA MATERIA
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E-mail: <giuseppe.mattioli at ism.cnr.it>
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