[QE-users] (no subject)

[Minho Lee]

Dear TaeHwan Moon,

I’m sorry for the typo(ion_positions->atomic_positions )

Did you check your output?

In the standard output, you can find “estimated …..RAM ….” lines.

and you can check real memory usage of your computer via linux command “free”

If physical memory of your computer is not enough, “Swap” will be increased

Sincerly,

Minho Lee
------------------------
Minho Lee
CEO/Developer
T. 02-3293-0204 | C. 010-2770-4080
E. mino at virtuallab.co.kr | H. http://www.virtuallab.co.kr

On-demand Materials Simulation
https://www.materialssquare.com
On 7 Sep 2018, 9:51 AM +0900, 문태환 <th4512 at cau.ac.kr>, wrote:
> Dear Minho Lee,
>
> Thank you for your kind reply.
>
> If you are talking about ATOMIC_POSITIONS, I thought I took a lot of text, so I excluded it when I wrote!
>
> I have run the calculations by reducing the Processes (MPI) to 4, but the calculations are still going smoothly without exceeding the memory.
>
> But my PC does not use CPU well and calculation speed is slow.
>
> Like the Gaussian program,
>
> Do you know how to control the memory while allocating a lot of CPU in the calculation?
>
>
> -------------------------------------
> Moon TaeHwan
> Chung-Ang University
> th4512 at cau.ac.kr
> -------------------------------------
>
> 보낸 사람: Minho Lee <mino at simulation.re.kr> 대신 users <users-bounces at lists.quantum-espresso.org>
> 보낸 날짜: 2018년 9월 6일 목요일 오후 8:17:16
> 받는 사람: users at lists.quantum-espresso.org; Quantum Espresso users Forum
> 제목: Re: [QE-users] (no subject)
>
> Dear Taehwan Moon,
>
> I can’t find the &ION namelist in your script,
>
> I think you need to set ion_positions
>
> Sincerely,
>
> Minho Lee
> ------------------------
> Minho Lee
> CEO/Developer
> T. 02-3293-0204 | C. 010-2770-4080
> E. mino at virtuallab.co.kr | H. http://www.virtuallab.co.kr
>
> On-demand Materials Simulation
> https://www.materialssquare.com
> On 2018년 9월 6일 PM 7:48 +0900, 문태환 <th4512 at cau.ac.kr>, wrote:
> > Hello! Quantum espresso users.
> > I am a beginner user of QE and Linux, and I am having a lot of computation difficulties.
> > I need to calculate the SCF, DOS, and Band structure using a CIF file with zero-dimensional organic-inorganic hybrid materials.
> > However, when the SCF calculation starts and after an hour or so has elapsed, the memory problem causes an error.
> > My computer has 32 core CPU and 64GB of memory.  In the case of the CPU, there is room for using 8 cores when executing calculations.
> > (Processes (MPI) and Threads (openMP) use 8 and 4, respectively.)
> >
> > The input file looks like this:
> >
> > Can you give me advice to solve this problem?
> > Please help me .. Thank you.
> >
> >
> > &CONTROL
> >     calculation  = "scf"
> >     max_seconds  =  8.64000e+04
> >     pseudo_dir   = "/home/user/.burai/.pseudopot"
> >     restart_mode = "from_scratch"
> >     tprnfor      = .FALSE.
> >     tstress      = .FALSE.
> > /
> >
> > &SYSTEM
> >     a                         =  1.19962e+01
> >     b                         =  1.46765e+01
> >     c                         =  1.38899e+01
> >     constrained_magnetization = "none"
> >     cosac                     = -5.92053e-02
> >     degauss                   =  1.00000e-02
> >     ecutrho                   =  5.06000e+02
> >     ecutwfc                   =  5.62066e+01
> >     ibrav                     = -12
> >     lda_plus_u                = .FALSE.
> >     nat                       = 192
> >     nosym                     = .FALSE.
> >     nspin                     = 1
> >     ntyp                      = 5
> >     occupations               = "smearing"
> >     smearing                  = "guassian"
> >     starting_magnetization(1) =  0.00000e+00
> > /
> >
> > &ELECTRONS
> >     conv_thr         =  1.00000e-06
> >     diago_david_ndim = 4
> >     diagonalization  = "david"
> >     electron_maxstep = 100
> >     mixing_beta      =  7.00000e-01
> >     mixing_mode      = "plain"
> >     mixing_ndim      = 8
> >     startingpot      = "atomic"
> >     startingwfc      = "atomic+random"
> > /
> >
> > K_POINTS {automatic}
> >  3  3  3  0 0 0
> >
> > ATOMIC_SPECIES
> > Bi    208.98038  Bi.pbe-dn-kjpaw_psl.1.0.0.UPF
> > Br     79.90400  Br.pbe-dn-kjpaw_psl.1.0.0.UPF
> > N      14.00674  N.pbe-n-kjpaw_psl.1.0.0.UPF
> > H       1.00794  H.pbe-kjpaw_psl.1.0.0.UPF
> > C      12.01070  C.pbe-n-kjpaw_psl.1.0.0.UPF
> >
> >
> >
> > -------------------------------------
> > Moon TaeHwan
> > Chung-Ang University
> > th4512 at cau.ac.kr
> > -------------------------------------
> >
> > _______________________________________________
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> > users at lists.quantum-espresso.org
> > https://lists.quantum-espresso.org/mailman/listinfo/users
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