[Pw_forum] GPU14.03 compiling error

PePe pepe.physics at gmail.com
Mon Apr 7 20:55:49 CEST 2014 

I have just noticed that during the compilation I get a warning about
missing include directory
Warning: Nonexistent include directory
"/home/pepe/src/espresso-5.0.99/GPU/..//quark/include"
Where can I find this library?


On Mon, Apr 7, 2014 at 12:49 PM, Ari P Seitsonen <Ari.P.Seitsonen at iki.fi>wrote:

>
> PS Sorry - pardon :
>
> make -f Makefile.gpu pw-gpu LD_SHARED_FLAGS=-shared
>
>
> -=*=-=*=-=*=-=*=-=*=-=*=-=*=-=*=-=*=-=*=-=*=-=*=-=*=-=*=-=*=
> -=*=-=*=-=*=-=*=-
>   Ari Paavo Seitsonen / Ari.P.Seitsonen at iki.fi / http://www.iki.fi/~apsi/
>   Institut für Chemie der Universität Zürich, CH-8057 Zürich
>   Tel: +41 44 63 54 497  /  Mobile: +41 79 71 90 935
>
>
> On Mon, 7 Apr 2014, PePe wrote:
>
>  I also have a problem with the compilation. I downloaded
>> espresso-5.0.99.tar.gz and QE-GPU-14.03.0.tar.gz, placed GPU directory in
>> espresso main directory (did not apply any patches). Then,
>> in GPU directory I run:
>> ./configure --disable-parallel --enable-openmp --enable-cuda
>> --with-gpu-arch=sm_35 --with-cuda-dir=$CUDA_HOME --with-magma --with-phigemm
>> cd ..
>> make -f Makefile.gpu pw-gpu
>>
>> the error I get is as follows:
>>
>> cc -O3 -fopenmp -fPIC -z muldefs  -o libphigemm.so.2.0
>> phigemm_auxiliary.o phigemm_env.o phigemm_dgemm.o phigemm_zgemm.o
>> phigemm_dgemm_specialK.o phigemm_zgemm_specialK.o phigemm_cgemm.o
>> phigemm_sgemm.o -L/usr/local/cuda-5.5/lib64 -lcublas  -lcufft -lcudart
>> /home/pepe/src/espresso-5.0.99/GPU/..//phiGEMM/lib/libphigemm.a   -lblas
>>  -L/usr/local/cuda-5.5/lib64 -lcublas  -lcufft
>> -lcudart
>> /usr/bin/ld: /usr/lib/debug/usr/lib/x86_64-linux-gnu/crt1.o(.debug_info):
>> relocation 0 has invalid symbol index 11
>> /usr/bin/ld: /usr/lib/debug/usr/lib/x86_64-linux-gnu/crt1.o(.debug_info):
>> relocation 1 has invalid symbol index 12
>> /usr/bin/ld: /usr/lib/debug/usr/lib/x86_64-linux-gnu/crt1.o(.debug_info):
>> relocation 2 has invalid symbol index 2
>> /usr/bin/ld: /usr/lib/debug/usr/lib/x86_64-linux-gnu/crt1.o(.debug_info):
>> relocation 3 has invalid symbol index 2
>> /usr/bin/ld: /usr/lib/debug/usr/lib/x86_64-linux-gnu/crt1.o(.debug_info):
>> relocation 4 has invalid symbol index 11
>> /usr/bin/ld: /usr/lib/debug/usr/lib/x86_64-linux-gnu/crt1.o(.debug_info):
>> relocation 5 has invalid symbol index 13
>> /usr/bin/ld: /usr/lib/debug/usr/lib/x86_64-linux-gnu/crt1.o(.debug_info):
>> relocation 6 has invalid symbol index 13
>> /usr/bin/ld: /usr/lib/debug/usr/lib/x86_64-linux-gnu/crt1.o(.debug_info):
>> relocation 7 has invalid symbol index 13
>> /usr/bin/ld: /usr/lib/debug/usr/lib/x86_64-linux-gnu/crt1.o(.debug_info):
>> relocation 8 has invalid symbol index 12
>> /usr/bin/ld: /usr/lib/debug/usr/lib/x86_64-linux-gnu/crt1.o(.debug_info):
>> relocation 9 has invalid symbol index 13
>> /usr/bin/ld: /usr/lib/debug/usr/lib/x86_64-linux-gnu/crt1.o(.debug_info):
>> relocation 10 has invalid symbol index 13
>> /usr/bin/ld: /usr/lib/debug/usr/lib/x86_64-linux-gnu/crt1.o(.debug_info):
>> relocation 11 has invalid symbol index 13
>> /usr/bin/ld: /usr/lib/debug/usr/lib/x86_64-linux-gnu/crt1.o(.debug_info):
>> relocation 12 has invalid symbol index 13
>> /usr/bin/ld: /usr/lib/debug/usr/lib/x86_64-linux-gnu/crt1.o(.debug_info):
>> relocation 13 has invalid symbol index 13
>> /usr/bin/ld: /usr/lib/debug/usr/lib/x86_64-linux-gnu/crt1.o(.debug_info):
>> relocation 14 has invalid symbol index 13
>> /usr/bin/ld: /usr/lib/debug/usr/lib/x86_64-linux-gnu/crt1.o(.debug_info):
>> relocation 15 has invalid symbol index 13
>> /usr/bin/ld: /usr/lib/debug/usr/lib/x86_64-linux-gnu/crt1.o(.debug_info):
>> relocation 16 has invalid symbol index 13
>> /usr/bin/ld: /usr/lib/debug/usr/lib/x86_64-linux-gnu/crt1.o(.debug_info):
>> relocation 17 has invalid symbol index 13
>> /usr/bin/ld: /usr/lib/debug/usr/lib/x86_64-linux-gnu/crt1.o(.debug_info):
>> relocation 18 has invalid symbol index 13
>> /usr/bin/ld: /usr/lib/debug/usr/lib/x86_64-linux-gnu/crt1.o(.debug_info):
>> relocation 19 has invalid symbol index 21
>> /usr/bin/ld: /usr/lib/debug/usr/lib/x86_64-linux-gnu/crt1.o(.debug_line):
>> relocation 0 has invalid symbol index 2
>> /usr/lib/gcc/x86_64-linux-gnu/4.6/../../../x86_64-linux-gnu/crt1.o: In
>> function `_start':
>> (.text+0x20): undefined reference to `main'
>> collect2: ld returned 1 exit status
>> make[3]: *** [shared] Error 1
>> make[3]: Leaving directory `/home/pepe/src/espresso-5.0.99/phiGEMM/src'
>> make[2]: *** [phigemm] Error 2
>> make[2]: Leaving directory `/home/pepe/src/espresso-5.0.99/phiGEMM'
>> make[1]: *** [libphiGEMM] Error 2
>> make[1]: Leaving directory `/home/pepe/src/espresso-5.0.99/GPU/install'
>> make: *** [libphiGEMM] Error 2
>>
>> Can somebody please help me.
>>
>>
>>
>> On Sun, Apr 6, 2014 at 1:39 AM, 薛诗川 <nudt.xueshichuan at gmail.com> wrote:
>>       oh sorry .it seems that i got it , is it espresso-5.0.99.tar.gz?
>>
>>       2014-04-06 15:27 GMT+08:00, 薛诗川 <nudt.xueshichuan at gmail.com>:
>>       > Thank u professor
>>       > i'll test as soon as possible and tell u the results.
>>       > but the latest version is 5.0.2,right?
>>       > when will 5.1 be released?
>>       >
>>       > 2014-04-03 11:18 GMT+08:00, 薛诗川 <nudt.xueshichuan at gmail.com>:
>>       >> dear all,
>>       >> happy to see that GPU 14.03 has been released, so
>>       >> i tried to compile it for calculation.
>>       >> i just followed the instructions in the README file and added few
>>       >> manual DFLAGS and make.
>>       >> but during the process, it failed with such an error:
>>       >> Fatal error: cannot open mudule file 'mp_bands.mod' for reading.
>>       >> i cannot figure out its reasons.
>>       >> need  your help
>>       >> thanks.
>>       >>
>>       >
>>
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>>
>>
>>
>>
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