[Pw_forum] errors in *.err files

[Paolo Giannozzi]

This is what I found after a quick google search:
https://lists.sdsc.edu/pipermail/npaci-rocks-discussion/2011-February/051353.html
Not sure it is relevant to your case, though

P.

On Thu, 2013-05-23 at 18:30 +0200, Goranka Bilalbegovic wrote:
> Intel compilers at the cluster I am using recently have been replaced
> with gfortran/gcc. I compiled  espresso-5.0.2 an did not notice
> anything unusual at the configure and compilation steps. However,
> while running pw jobs (my own and examples) I found that *.err  files
> (from sge scripts) are not empty:
> 
> 
> [0] 16 at [0x00000000022d4628], grouputil.c[75]
> [0] 8 at [0x00000000022d4578], local_proc.c[91]
> [0] 8 at [0x00000000022d44c8], local_proc.c[90]
> [0] 32 at [0x00000000022d43f8], mpid_vc.c[93]
> [0] 16 at [0x00000000022d4338], grouputil.c[75]
> [0] 8 at [0x00000000022d4288], local_proc.c[91]
> [0] 8 at [0x00000000022d41d8], local_proc.c[90]
> [0] 32 at [0x00000000022d4108], mpid_vc.c[93]
> [0] 16 at [0x00000000022d4048], grouputil.c[75]
> [0] 8 at [0x00000000022d3f98], local_proc.c[91]
> [0] 8 at [0x00000000022d3ee8], local_proc.c[90]
> [0] 32 at [0x00000000022d3e18], mpid_vc.c[93]
> [0] 16 at [0x00000000022d3d58], grouputil.c[75]
> [0] 8 at [0x00000000022d3ca8], local_proc.c[91]
> [0] 8 at [0x00000000022d3bf8], local_proc.c[90]
> [0] 32 at [0x00000000022d3a78], mpid_vc.c[93]
> ... (more lines)
> 
> 
> The compiler version is:
> 
> 
> mpicc for MVAPICH2 version 1.8a2
> Using built-in specs.
> Target: x86_64-redhat-linux
> Configured with: ../configure --prefix=/usr --mandir=/usr/share/man
> --infodir=/usr/share/info 
> --with-bugurl=http://bugzilla.redhat.com/bugzilla --enable-bootstrap
> --enable-shared 
> --enable-threads=posix --enable-checking=release --with-system-zlib
> --enable-__cxa_atexit 
> --disable-libunwind-exceptions --enable-gnu-unique-object 
> --enable-languages=c,c++,objc,obj-c++,java,fortran,ada
> --enable-java-awt=gtk 
> --disable-dssi
> --with-java-home=/usr/lib/jvm/java-1.5.0-gcj-1.5.0.0/jre 
> --enable-libgcj-multifile --enable-java-maintainer-mode 
> --with-ecj-jar=/usr/share/java/eclipse-ecj.jar
> --disable-libjava-multilib 
> --with-ppl --with-cloog --with-tune=generic --with-arch_32=i686
> --build=x86_64-redhat-linux
> Thread model: posix
> gcc version 4.4.6 20120305 (Red Hat 4.4.6-4) (GCC) 
> 
> 
> 
> 
> The results from examples are OK, but I would like to know why lines
> like this appear. Is it dangerous ?
> Thank you very much for your answer.
> Best regards,
> -- 
> Goranka Bilalbegovic 
> Department of Physics, Faculty of Science, 
> University of Zagreb, Croatia
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-- 
Paolo Giannozzi, Dept. Chemistry&Physics&Environment, 
Univ. Udine, via delle Scienze 208, 33100 Udine, Italy
Phone +39-0432-558216, fax +39-0432-558222