[Pw_forum] -rsh error in phonon calculation

[Mohammad Saghayezhian]

Hello everybody,

I have a job file that perform a scf calculation (pw.x)
and phonon calculation (ph.x).

the script runs good for pw.x but when It reaches to run ph.x it gives me
this error:

Unable to read script file because of error: ERROR! invalid option argument
"-rsh"

mpi is fine and the espresso version is 4.1.2 and it does good for any other
calculation
but for phonon calculation that error appears

here is the script:


#!/bin/csh -f

#$ -N Auphon
#$ -S /bin/csh
#$ -pe mpi_o_* 16
#$ -M  m.saghayezhian at gmail.com
#$ -m baes
#$ -o $JOB_NAME.$JOB_ID.out
#$ -notify
#$ -cwd
#$ -l h_rt=200:00:00

set mpi="/home-fs4/sp0088/mpi/xeon/mvapich-1.1/bin/mpirun_rsh"
set pwx="/home-fs4/hp0070/softs/espresso-4.1.2/bin/pw.x"
set phx="/home-fs4/hp0070/softs/espresso-4.1.2/bin/ph.x"

set case=aup
set wdir=`pwd`
set scratchfile="/scratch/hp0070/$case"
#set makdir="mkdir -p $scratchfile"
#set deldir="rm -rf $scratchfile"

set HOSTFILE="$TMPDIR/machines"
cat $HOSTFILE > $wdir/$case.host
set nodes=16
setenv MKL_NUM_THREADS 1
setenv OMP_NUM_THREADS 1

mkdir -p $scratchfile

@ i=1
while ( $i <= $nodes )
set node=` head -$i $wdir/$case.host | tail -1 `
rsh $node $makdir
@ i= $i + 4
end

# cat $PE_HOSTFILE | cut -c 1-6 > .hostfile
# HOSTFILE=".hostfile" # HOSTFILE=$PE_HOSTFILE

echo $NSLOTS

### Here we have a real running command

$mpi -rsh -np 16 -legacy -hostfile $wdir/$case.host $pwx -npool 2 <
$wdir/au-a3.90108 > $wdir/scf.out

cat << end2 > $wdir/ph.in
phonon
&inputph
  tr2_ph=1.0d-14,
  prefix='Au',
  ldisp=.true.,
  nq1=4 , nq2=4 , nq3=4,
  amass(1)=196.96655,
  outdir='./',
  fildyn='au.dyn',
 /
end2

$mpi -rsh -np 16 -legacy -hostfile $wdir/$case.host $phx -npool 2 < $wdir/
ph.in > $wdir/ph.out

rm -rf $scratchfile
#./job1 #/homes/hp0070/bin/killpwx ./$case.host

rm -rf $scratchfile

@ i=1
while ( $i <= $nodes )
set node=` head -$i $wdir/$case.host | tail -1 `
rsh $node $deldir
@ i= $i + 4
end

echo finished






-------------------------------------------------------------------
Mohammad Saghayezhian
Computational Condensed Matter Research Lab
Physics Department, Isfahan University of Technology, Isfahan, Iran

Tel lab: +98 311 391 3731     Fax Office: +98311 391 3746
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