[Pw_forum] Parallel efficiency problem
vega lew
vegalew at hotmail.com
Tue Jul 29 10:49:45 CEST 2008
I think you should use 4 pools for this job
try to type command like this,
/usr/local/mpich/bin/mpirun -np 4 -machinefile nodelist /bin/pw.x -npools 4 < ZnO.scf.inp > ZnO.scf.outhope helps
Vega Lew (weijia liu)
PH.D Candidate in Chemical Engineering
State Key Laboratory of Materials-oriented Chemical Engineering
College of Chemistry and Chemical Engineering
Nanjing University of Technology, 210009, Nanjing, Jiangsu, China
> Date: Tue, 29 Jul 2008 14:03:12 +0800
> From: lihm at ihep.ac.cn
> To: pw_forum at pwscf.org
> Subject: [Pw_forum] Parallel efficiency problem
>
> Dear all,
>
> I am a fresh user of PWscf. I run the parallel calculations to have a test.
> A single process test is OK:
>
> PWSCF : 5m40.68s CPU time, 6m 0.14s wall time
>
> However, I found that the walltime is too long for parallel calculations:
>
> PWSCF : 1m 4.86s CPU time, 32m53.67s wall time
>
> I am sure that the CPU are not busy, or influenced by other jobs.
>
> The running command is:
>
> /usr/local/mpich/bin/mpirun -np 4 -machinefile nodelist /bin/pw.x < ZnO.scf.inp > ZnO.scf.out
>
> My input file is
>
> &CONTROL
> calculation = 'scf' ,
> restart_mode = 'from_scratch' ,
> outdir = './' ,
> wfcdir = '/tmp/' ,
> pseudo_dir = './' ,
> prefix = 'ZnO' ,
> disk_io = 'minimal' ,
> tstress = .true. ,
> tprnfor = .true. ,
> /
> &SYSTEM
> ibrav = 4,
> celldm(1) = 6.213,
> celldm(3) = 1.610,
> nat = 4,
> ntyp = 2,
> ecutwfc = 40 ,
> ecutrho = 400 ,
> /
> &ELECTRONS
> mixing_mode = 'plain' ,
> mixing_beta = 0.7 ,
> diagonalization = 'david' ,
> /
> ATOMIC_SPECIES
> Zn 65.39200 Zn.pbe-van.UPF
> O 16.00000 O.pbe-rrkjus.UPF
> ATOMIC_POSITIONS crystal
> Zn 0.666666667 0.333333333 0.000000000
> Zn 0.333333333 0.666666667 0.500000000
> O 0.666666667 0.333333333 0.380000000
> O 0.333333333 0.666666667 0.880000000
> K_POINTS automatic
> 16 16 8 0 0 0
>
> Can anyone help me to fix the problem? Thank you.
>
> Best wishes!
>
> Haiming Li
> 2008-07-29
>
> --------------
> Haiming Li
> Beijing Synchrotron Radiation Facility
> Institute of High Energy Physics
> Chinese Academy of Sciences
> 19 Yu Quan Lu, 100049 Beijing, P.R. China
> Tel: 0086+10 8823 6437 / 0086+135 8190 2824
> E-mail:lihm at ihep.ac.cn
>
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