[QE-users] Pair atoms from input with output atoms ?

Lorenzo Paulatto lorenzo.paulatto at cnrs.fr
Thu May 29 11:13:00 CEST 2025


Hello,

the atoms in input and output are in the same order. Even if you specify 
crystal_sg the multiplicity is known from the start (or you could use 
different species names for each if you wanted to). Is there a specific 
reason that prevents you from using this?

kind regards


On 28/05/2025 17:11, Husak Michal via users wrote:
> Hi all
>
> We search for a metod how to identify correspondence betwen atoms on 
> QE input and atoms in QE .out files.
>
> 1) QE does not support atom labels = the most reliable method can not 
> be used
> 2) We tested atom pairing based on position - it does not work when 
> atom position change significanty
>
> The target is to monitor input atoms positions changes during 
> structure geometry optimization (experimental X-ray structure 
> verification).
>
> Any idea is welcome.
>
> Michal Husak
> UCT Prague
>
>
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Dr. Lorenzo Paulatto
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