[QE-users] Finite Homogeneous Electric Field relaxation
Ortega Guerrero, Andres
Andres.Ortega-Guerrero at empa.ch
Wed Mar 22 09:49:54 CET 2023
Dear Users,
I am interested in conducting a relax calculation while I am applying a finite homogeneous electric field
Like in this paper (https://journals.aps.org/prl/abstract/10.1103/PhysRevLett.89.157602)
&CONTROL
calculation = 'relax'
etot_conv_thr = 1.0000000000d-05
forc_conv_thr = 1.0000000000d-04
outdir = './out/'
prefix = 'mos2'
pseudo_dir = './pseudo/'
verbosity = 'high'
lelfield = .true.
nberrycyc = 4
lberry = .true.
/
&SYSTEM
ecutrho = 2.8000000000d+02
ecutwfc = 3.5000000000d+01
degauss = 0.01
ibrav = 0
nat = 6
nosym = .false.
ntyp = 2
occupations = 'fixed'
nbnd = 48
/
&ELECTRONS
conv_thr = 1.0000000000d-8
electron_maxstep = 500
mixing_beta = 2.0000000000d-01
efield_cart(1) = 0.0001
efield_cart(2) = 0.000
efield_cart(3) = 0.000
/
&IONS
ion_dynamics = 'damp'
/
ATOMIC_SPECIES
Mo 95.96 Mo_ONCV_PBE-1.0.oncvpsp.upf
S 32.065 s_pbe_v1.4.uspp.F.UPF
ATOMIC_POSITIONS (crystal)
Mo 0.6666666667 0.3333333333 0.7500000000
Mo 0.3333333333 0.6666666667 0.2500000000
S 0.3333333333 0.6666666667 0.6420675408
S 0.6666666667 0.3333333333 0.1420675408
S 0.3333333333 0.6666666667 0.8579324592
S 0.6666666667 0.3333333333 0.3579324592
K_POINTS automatic
13 13 3 0 0 0
CELL_PARAMETERS (angstrom)
-1.592059766 -2.757528403 -0.000000000
-1.592059766 2.757528403 -0.000000000
0.000000000 0.000000000 -14.481261589
However I only manage to finish the first SCF ,
After that my simulations is stopped and I get these errors
WARNING: Only users belonging to group cpmd with a valid CPMD license are allowed to access CPMD/4.3-CrayIntel-21.09 executables and library files
Rank 33 [Thu Mar 9 16:14:39 2023] [c4-3c1s0n0] Fatal error in PMPI_Alltoall: Message truncated, error stack:
PMPI_Alltoall(884)..................: MPI_Alltoall(sbuf=0x155538b9d480, scount=41, MPI_DOUBLE_COMPLEX, rbuf=0x155531afa4c0, rcount=41, MPI_DOUBLE_COMPLEX, comm=0xc4000000) failed
MPIR_Alltoall_impl(716).............:
MPIDI_CRAY_ugni_alltoall(377).......:
MPIC_Irecv(785).....................:
MPIDI_CH3U_Request_unpack_uebuf(595): Message truncated; 688 bytes received but buffer size is 656
Rank 43 [Thu Mar 9 16:14:39 2023] [c4-3c1s0n1] Fatal error in PMPI_Alltoall: Message truncated, error stack:
PMPI_Alltoall(884)..................: MPI_Alltoall(sbuf=0x1555397b6280, scount=35, MPI_DOUBLE_COMPLEX, rbuf=0x1555342f92c0, rcount=35, MPI_DOUBLE_COMPLEX, comm=0xc4000000) failed
MPIR_Alltoall_impl(716).............:
MPIDI_CRAY_ugni_alltoall(377).......:
MPIC_Irecv(785).....................:
MPIDI_CH3U_Request_unpack_uebuf(595): Message truncated; 592 bytes received but buffer size is 560
Rank 14 [Thu Mar 9 16:14:39 2023] [c4-3c0s15n3] Fatal error in PMPI_Alltoall: Message truncated, error stack:
PMPI_Alltoall(884)..................: MPI_Alltoall(sbuf=0x15553f1f3c80, scount=47, MPI_DOUBLE_COMPLEX, rbuf=0x15552a2c8d00, rcount=47, MPI_DOUBLE_COMPLEX, comm=0xc4000000) failed
MPIR_Alltoall_impl(716).............:
MPIDI_CRAY_ugni_alltoall(377).......:
MPIC_Irecv(785).....................:
MPIDI_CH3U_Request_unpack_uebuf(595): Message truncated; 784 bytes received but buffer size is 752
I was wondering if you could give me advice of how to fix this, or if there is an issue in my input
Best
Andres Ortega-Guerrero
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