[QE-users] QE-GPU and libxc compile error

Lorenzo Bastonero lbastone at uni-bremen.de
Fri Apr 21 12:51:39 CEST 2023


Dear Michele,

If I am not mistaken, as from QE v.7.0 you would need to have git v.2.13 or later (see here <https://gitlab.com/QEF/q-e/-/wikis/Support/Prerequisites>). Could you check if this applies to you?
I had a similar error when compiling with an older version of git. Plus, also make sure you have the m4 package installed.

Let me know if that helps,
Lorenzo

********************************
Lorenzo Bastonero

PhD Student
U Bremen Excellence Chair,
Bremen Center for Computational Materials Science,
and MAPEX Center for Materials and Processes

University of Bremen
Faculty of Production Engineering
TAB-Building, Room 3.32
Am Fallturm 1
28359 Bremen, DE

http://www.hmi.uni-bremen.de/

> Il giorno 21 apr 2023, alle ore 12:28, Michele Re Fiorentin <michele.refiorentin at polito.it> ha scritto:
> 
> Dear QE developers and users,
> 
> I’m trying to install QE on a GPU-accelerated system (M100) while linking it to libxc. I’ve compiled both libxc (version 7.0.0) and QE (version 7.2) with the same compilers and libraries:
> 
> LIBXC:  ./configure CC=pgcc F77=pgf90 FC=pgf90 F90=pgf90 MPIF90=mpipgifort --prefix=/m100/home/userexternal/mrefiore/libxc
> 
> QE: ./configure CC=pgcc F77=pgf90 FC=pgf90 F90=pgf90 MPIF90=mpipgifort --enable-openmp --with-cuda=/cineca/prod/opt/compilers/cuda/11.0/none --with-cuda-runtime=11.0 --with-cuda-cc=70 --with-scalapack=no --enable-cuda-env-check=no --with-libxc=yes --with-libxc-prefix=/m100/home/userexternal/mrefiore/libxc --with-libxc-include=/m100/home/userexternal/mrefiore/libxc/include
> 
> Libxc compiles very well without problems.
> QE configure runs smoothly, the library is found and the linker does not complain. 
> However, when compiling pw I get the following error
> 
> make[1]: Entering directory '/m100/home/userexternal/mrefiore/qe-7.1_libxc/XClib'
> mpipgifort -fast -Mcache_align -Mpreprocess -Mlarge_arrays -mp -D__PGI -D__CUDA -D__FFTW3 -D__LIBXC -D__MPI  -Mcuda=cc70,cuda11.0 -I/m100/home/userexternal/mrefiore/qe-7.1_libxc//external/devxlib/src -I/m100/home/userexternal/mrefiore/qe-7.1_libxc//external/devxlib/include -acc -I/m100/home/userexternal/mrefiore/qe-7.1_libxc//external/devxlib/src -I. -I/m100/home/userexternal/mrefiore/qe-7.1_libxc//include -I/cineca/prod/opt/libraries/fftw/3.3.8/gnu--8.4.0/include -I/m100/home/userexternal/mrefiore/libxc/include -I/m100/home/userexternal/mrefiore/qe-7.1_libxc//upflib -c dft_setting_routines.f90
> NVFORTRAN-S-0038-Symbol, xc_family_hyb_gga, has not been explicitly declared (dft_setting_routines.f90)
> NVFORTRAN-S-0038-Symbol, xc_family_hyb_mgga, has not been explicitly declared (dft_setting_routines.f90)
>  0 inform,   0 warnings,   2 severes, 0 fatal for matching_shortids
> NVFORTRAN-S-0038-Symbol, xc_family_hyb_lda, has not been explicitly declared (dft_setting_routines.f90)
> NVFORTRAN-S-0038-Symbol, xc_family_hyb_gga, has not been explicitly declared (dft_setting_routines.f90)
> NVFORTRAN-S-0038-Symbol, xc_family_hyb_mgga, has not been explicitly declared (dft_setting_routines.f90)
>  0 inform,   0 warnings,   3 severes, 0 fatal for xclib_set_auxiliary_flags
> make[1]: *** [../make.inc:16: dft_setting_routines.o] Error 2
> make[1]: Leaving directory '/m100/home/userexternal/mrefiore/qe-7.1_libxc/XClib'
> make: *** [Makefile:206: librxc] Error 1
> 
> 
> Clearly the compilation fails. I can’t figure out how to solve the issues with those symbols “not declared”. Is it a compiler incompatibility? 
> Any help would be much appreciated!
> 
> 
> Michele
> 
> 
> 
> 
> --
> Michele Re Fiorentin, PhD
> 
> Department of Applied Science and Technology (DISAT) 
> Politecnico di Torino 
> corso Duca degli Abruzzi 24, 10129 Torino (Italy)
> tel: +39 0110904333
> 
> _______________________________________________
> The Quantum ESPRESSO community stands by the Ukrainian
> people and expresses its concerns about the devastating
> effects that the Russian military offensive has on their
> country and on the free and peaceful scientific, cultural,
> and economic cooperation amongst peoples
> _______________________________________________
> Quantum ESPRESSO is supported by MaX (www.max-centre.eu)
> users mailing list users at lists.quantum-espresso.org
> https://lists.quantum-espresso.org/mailman/listinfo/users

-------------- next part --------------
An HTML attachment was scrubbed...
URL: <http://lists.quantum-espresso.org/pipermail/users/attachments/20230421/1dd59233/attachment.html>


More information about the users mailing list