[QE-users] Regarding projected density of state
Stefano Baroni
baroni at sissa.it
Sat Oct 9 14:01:33 CEST 2021
As illogic as the naming convention may seem to some, it is not. The only feature a pseudo-wavefunction may me characterised with is the number of nodes of its radial component. In fact, pseudo-potentials are constructed exactly from the requirement that their lowest-lying states (which are node-less, as you can check at page 33 of your favorite quantum mechanics textbook) match the energy and the main lobe of the all-electron radial wave-function. Summarising: the lowest-lying atomic orbital of a pseudo-atom is always nodeless (by construction) the code labels it as 1s, 2p, 3d, etc. (n=1, l-0; n=2, l-1; n=3, l=2) the number of nodes is always n-l-1 (page 34 of the above textbook): you can check for yourself that it is 0 for 1s, 2p, 3d, 4f, etc. The code cannot know the radial quantum of the “real” orbital. It does know the angular quantum number and the number of nodes, though …
Hope this clarifies a little bit the whole matter.
SB
> On 9 Oct 2021, at 11:37, Giuseppe Mattioli <giuseppe.mattioli at ism.cnr.it> wrote:
>
>
> Dear user (please sign your posts with name and affiliation)
>
> Orbitals are ordered according to pseudowavefunctions in the pseudopotential. It is cumbersome but not difficult to reorder them
>
> 1s = 3s
> 2p = 3p
> 3s = 4s
> 4d = 3d
>
> HTH
> Giuseppe
>
> Quoting Satyasiban Dash ph19d005 <ph19d005 at smail.iitm.ac.in>:
>
>> Dear Users
>>
>> I need a little confirmation about nomenclature of outputfiles projwfc.x
>> generates. I was calculating PDOS of ZnO using pseudopotential from ps
>> library (PBE-GGA) . Its well known that ZnO has 4s,2s,2p and 3d orbital
>> but I am getting 1s,2p,3s,4d
>> &CONTROL
>> calculation = 'scf' ,
>> outdir = 'job$tpdir' ,
>> pseudo_dir = '/lfs/usrhome/phd/ph19d005/pseudo' ,
>> prefix = 'zn' ,
>> lkpoint_dir = .false. ,
>> verbosity = 'low' ,
>> etot_conv_thr = 1.0d-05 ,
>> forc_conv_thr = 1.00d-04 ,
>>
>> /
>> &SYSTEM
>> ibrav = 0,
>> nat = 4,
>> ntyp = 2,
>> ecutwfc = 40 ,
>> ecutrho = 500 ,
>> nbnd =30
>> occupations = 'smearing' ,
>> smearing ='gaussian'
>> /
>> &ELECTRONS
>> electron_maxstep = 80,
>> conv_thr = 8.0000000000d-10 ,
>> adaptive_thr = .false. ,
>> mixing_beta = 4.0000000000d-01 ,
>> /
>> CELL_PARAMETERS angstrom
>> 3.289102049 0.000000000 0.000000000
>> -1.644551024 2.848445930 0.000000000
>> 0.000000000 0.000000000 5.306821000
>> ATOMIC_SPECIES
>> O 15.99940 O.pbe-nl-kjpaw_psl.1.0.0.UPF
>> Zn 65.38000 Zn.pbe-spn-kjpaw_psl.1.0.0.UPF
>> ATOMIC_POSITIONS crystal
>> Zn 0.333333333 0.666666667 0.000548000
>> Zn 0.666666667 0.333333333 0.500548000
>> O 0.333333333 0.666666667 0.379762000
>> O 0.666666667 0.333333333 0.879762000
>> K_POINTS automatic
>> 12 12 6 0 0 0
>>
>>
>>
>>
>> &PROJWFC
>> prefix = '$pref' ,
>> outdir =
>> '/lfs/usrhome/phd/ph19d005/scratch/job444857/job444857' ,
>> filpdos = 'zn_pdos.dat' ,
>> filproj = 'zn_proj.dat' ,
>> ngauss = 0,
>> degauss = 0.01 ,
>> DeltaE = 0.01 ,
>> Emin = -8 ,
>> Emax = 8 ,
>> /
>>
>> Is it an indication error or something else
>
>
>
> GIUSEPPE MATTIOLI
> CNR - ISTITUTO DI STRUTTURA DELLA MATERIA
> Via Salaria Km 29,300 - C.P. 10
> I-00015 - Monterotondo Scalo (RM)
> Mob (*preferred*) +39 373 7305625
> Tel + 39 06 90672342 - Fax +39 06 90672316
> E-mail: <giuseppe.mattioli at ism.cnr.it>
>
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—
Stefano Baroni - Trieste — http://stefano.baroni.me <http://stefano.baroni.me/>
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