[QE-users] [QE-GPU] Input is ignored in vc-relax calculation

Yuvam Bhateja yuvamb16 at gmail.com
Sat May 30 14:25:45 CEST 2020


Ok I'll try that, thank you
But I've used the same input before in Ubuntu only but on CPU parallelized
QE and it worked fine. I've been using the same format for a long time now.

On Sat, 30 May 2020, 5:52 pm Pietro Bonfa, <pietro.bonfa at unipr.it> wrote:

> I see carriage returns in your input file.
>
> Try removing them with something like
>
> cat input.in |  dos2unix -U > clean_input.in
>
> or other methods (*)
>
> Best regards,
> Pietro
>
> *
> https://stackoverflow.com/questions/800030/remove-carriage-return-in-unix
>
> On 5/30/20 2:09 PM, Yuvam Bhateja wrote:
> > No no...
> > It was before position
> > Apparently, all the cards are getting ignored
> > I've attached the input and output files.
> >
> > On Sat, 30 May 2020, 5:36 pm Lorenzo Paulatto, <paulatz at gmail.com
> > <mailto:paulatz at gmail.com>> wrote:
> >
> >     Did you put ATOMIC_SPECIES after ATOMIC_POSITIONS?
> >
> >     --
> >     Lorenzo Paulatto
> >
> >     On Fri, 29 May 2020, 19:52 Yuvam Bhateja, <yuvamb16 at gmail.com
> >     <mailto:yuvamb16 at gmail.com>> wrote:
> >
> >         Hey,
> >         I am running my vc-relax calculation on google colab through
> >         cuda compiled QE and it is showing error like -
> >         Serial multi-threaded version, running on 1 processor cores Fft
> >         bands division: nmany = 1 Reading input from espresso.opt.in
> >         <
> https://eur01.safelinks.protection.outlook.com/?url=http%3A%2F%2Fespresso.opt.in%2F&data=02%7C01%7Cpietro.bonfa%40unipr.it%7Caa83322239f743dd519b08d804925a85%7Cbb064bc5b7a841ecbabed7beb3faeb1c%7C0%7C0%7C637264373913894320&sdata=PInYxVdtxvzbdx5c79w2B%2FwsJbXP74JhIdJZvl0S0Tc%3D&reserved=0
> >
> >         ignored ignored ignored ignored ignored ignored ignored ignored
> >         ignored ignored ignored ignored ignored ignored ignored
> >
>  %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
> >         Error in routine card_atomic_positions (2): ATOMIC_SPECIES must
> >         be present before
> >
>  %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
> >         stopping ... Warning: ieee_inexact is signaling 1
> >
> >         I tried some other calculations and a relax calc of lesser atoms
> >         (23 atoms) also give same error but scf cal of 2 Si atoms works
> >         successfully.
> >
> >         Please, someone, help
> >         Regards Yuvam
> >         _______________________________________________
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