[QE-users] [External Email] Re: Error in compiling andinstalling QE

Tue Jun 23 15:22:27 CEST 2020

Hi Pooja 
You should change the PREFIX variable in the make.inc file in order that it point to some position where you have writing access and then run 
make install 

Pietro

Sent from Mail for Windows 10

From: Pooja Vyas
Sent: Tuesday, June 23, 2020 3:12 PM
To: Quantum ESPRESSO users Forum
Subject: Re: [QE-users] [External Email] Re: Error in compiling andinstalling QE

I'm trying to install in my own system..then what about permissions?

On Tue, 23 Jun 2020, 6:04 pm Hari Paudyal, <hpaudya1 at binghamton.edu> wrote:
Hi Pooja,

I think you are working in a directory (user/local/bin) where you do not have permission. Ask your administrator/cluster manager for permission.

Best,
Hari Paudyal
Binghamton University, SUNY NY

On Mon, Jun 22, 2020 at 2:22 PM Pooja Vyas <poojavyas595 at gmail.com> wrote:
Dear users,
I even met with an error after the command "make install" which are as follows:

cp: cannot create regular file '/usr/local/bin/wfdd.x': Permission denied
cp: cannot create regular file '/usr/local/bin/cppp.x': Permission denied
cp: cannot create regular file '/usr/local/bin/cp.x': Permission denied
cp: cannot create regular file '/usr/local/bin/manycp.x': Permission denied
cp: cannot create regular file '/usr/local/bin/head.x': Permission denied
cp: cannot create regular file '/usr/local/bin/bse_main.x': Permission denied
cp: cannot create regular file '/usr/local/bin/gww.x': Permission denied
cp: cannot create regular file '/usr/local/bin/gww_fit.x': Permission denied
cp: cannot create regular file '/usr/local/bin/pw4gww.x': Permission denied
cp: cannot create regular file '/usr/local/bin/neb.x': Permission denied
cp: cannot create regular file '/usr/local/bin/path_interpolation.x': Permission denied
cp: cannot create regular file '/usr/local/bin/phcg.x': Permission denied
cp: cannot create regular file '/usr/local/bin/fd_ef.x': Permission denied
cp: cannot create regular file '/usr/local/bin/fd_ifc.x': Permission denied
cp: cannot create regular file '/usr/local/bin/fd.x': Permission denied
cp: cannot create regular file '/usr/local/bin/ph.x': Permission denied
cp: cannot create regular file '/usr/local/bin/q2qstar.x': Permission denied
cp: cannot create regular file '/usr/local/bin/lambda.x': Permission denied
cp: cannot create regular file '/usr/local/bin/alpha2f.x': Permission denied
cp: cannot create regular file '/usr/local/bin/q2r.x': Permission denied
cp: cannot create regular file '/usr/local/bin/dynmat.x': Permission denied
cp: cannot create regular file '/usr/local/bin/matdyn.x': Permission denied
cp: cannot create regular file '/usr/local/bin/q2trans.x': Permission denied
cp: cannot create regular file '/usr/local/bin/fqha.x': Permission denied
cp: cannot create regular file '/usr/local/bin/q2trans_fd.x': Permission denied
cp: cannot create regular file '/usr/local/bin/wannier_ham.x': Permission denied
cp: cannot create regular file '/usr/local/bin/fermi_proj.x': Permission denied
cp: cannot create regular file '/usr/local/bin/wannier_plot.x': Permission denied
cp: cannot create regular file '/usr/local/bin/dos.x': Permission denied
cp: cannot create regular file '/usr/local/bin/plan_avg.x': Permission denied
cp: cannot create regular file '/usr/local/bin/pmw.x': Permission denied
cp: cannot create regular file '/usr/local/bin/bgw2pw.x': Permission denied
cp: cannot create regular file '/usr/local/bin/pw_export.x': Permission denied
cp: cannot create regular file '/usr/local/bin/epsilon.x': Permission denied
cp: cannot create regular file '/usr/local/bin/bands.x': Permission denied
cp: cannot create regular file '/usr/local/bin/plotproj.x': Permission denied
cp: cannot create regular file '/usr/local/bin/average.x': Permission denied
cp: cannot create regular file '/usr/local/bin/pawplot.x': Permission denied
cp: cannot create regular file '/usr/local/bin/projwfc.x': Permission denied
cp: cannot create regular file '/usr/local/bin/plotrho.x': Permission denied
cp: cannot create regular file '/usr/local/bin/wfck2r.x': Permission denied
cp: cannot create regular file '/usr/local/bin/plotband.x': Permission denied
cp: cannot create regular file '/usr/local/bin/fs.x': Permission denied
cp: cannot create regular file '/usr/local/bin/sumpdos.x': Permission denied
cp: cannot create regular file '/usr/local/bin/pw2bgw.x': Permission denied
cp: cannot create regular file '/usr/local/bin/fermi_velocity.x': Permission denied
cp: cannot create regular file '/usr/local/bin/importexport_binary.x': Permission denied
cp: cannot create regular file '/usr/local/bin/pw2wannier90.x': Permission denied
cp: cannot create regular file '/usr/local/bin/initial_state.x': Permission denied
cp: cannot create regular file '/usr/local/bin/pp.x': Permission denied
cp: cannot create regular file '/usr/local/bin/pw2gw.x': Permission denied
cp: cannot create regular file '/usr/local/bin/molecularpdos.x': Permission denied
cp: cannot create regular file '/usr/local/bin/pw.x': Permission denied
cp: cannot create regular file '/usr/local/bin/generate_vdW_kernel_table.x': Permission denied
cp: cannot create regular file '/usr/local/bin/generate_rVV10_kernel_table.x': Permission denied
cp: cannot create regular file '/usr/local/bin/pwi2xsf.x': Permission denied
cp: cannot create regular file '/usr/local/bin/kpoints.x': Permission denied
cp: cannot create regular file '/usr/local/bin/ev.x': Permission denied
cp: cannot create regular file '/usr/local/bin/ibrav2cell.x': Permission denied
cp: cannot create regular file '/usr/local/bin/pwcond.x': Permission denied
cp: cannot create regular file '/usr/local/bin/iotk_print_kinds.x': Permission denied
cp: cannot create regular file '/usr/local/bin/iotk.x': Permission denied
cp: cannot create regular file '/usr/local/bin/turbo_lanczos.x': Permission denied
cp: cannot create regular file '/usr/local/bin/turbo_davidson.x': Permission denied
cp: cannot create regular file '/usr/local/bin/turbo_eels.x': Permission denied
cp: cannot create regular file '/usr/local/bin/turbo_spectrum.x': Permission denied
cp: cannot create regular file '/usr/local/bin/molecularnexafs.x': Permission denied
cp: cannot create regular file '/usr/local/bin/xspectra.x': Permission denied
cp: cannot create regular file '/usr/local/bin/spectra_correction.x': Permission denied
cp: cannot create regular file '/usr/local/bin/ld1.x': Permission denied
cp: cannot create regular file '/usr/local/bin/test.x': Permission denied
cp: cannot create regular file '/usr/local/bin/interpolate.x': Permission denied
cp: cannot create regular file '/usr/local/bin/uspp2upf.x': Permission denied
cp: cannot create regular file '/usr/local/bin/fhi2upf.x': Permission denied
cp: cannot create regular file '/usr/local/bin/read_upf_tofile.x': Permission denied
cp: cannot create regular file '/usr/local/bin/rrkj2upf.x': Permission denied
cp: cannot create regular file '/usr/local/bin/oldcp2upf.x': Permission denied
cp: cannot create regular file '/usr/local/bin/vdb2upf.x': Permission denied
cp: cannot create regular file '/usr/local/bin/fpmd2upf.x': Permission denied
cp: cannot create regular file '/usr/local/bin/virtual.x': Permission denied
cp: cannot create regular file '/usr/local/bin/upf2casino.x': Permission denied
cp: cannot create regular file '/usr/local/bin/ncpp2upf.x': Permission denied
cp: cannot create regular file '/usr/local/bin/casino2upf.x': Permission denied
cp: cannot create regular file '/usr/local/bin/cpmd2upf.x': Permission denied
make: *** [Makefile:273: install] Error 1

On Mon, Jun 22, 2020 at 11:41 PM Pooja Vyas <poojavyas595 at gmail.com> wrote:
Dear users,
I'm trying to install QE-6.5, but I met with the following error which appears multiple times while giving 'make all' command..Can anyone suggest how do I install and compile perfectly without this error?
f951: Warning: Nonexistent include directory ‘../include/’ [-Wmissing-include-dirs]
mpif90 -O3 -g -fopenmp -x f95-cpp-input -fopenmp -D__OPENMP -D__FFTW -D__MPI  -I/home/pooja/q-e-qe-6.2.0//include -I/home/pooja/q-e-qe-6.2.0//FoX/finclude -I../include/ -I../../iotk/src -I../../Modules -I../../FFTXlib -I../../LAXlib -I../../UtilXlib -I../../KS_Solvers/Davidson -I../../KS_Solvers/CG -I../../dft-d3/ -c set_vrs.f90
f951: Warning: Nonexistent include directory ‘../include/’ [-Wmissing-include-dirs]
mpif90 -O3 -g -fopenmp -x f95-cpp-input -fopenmp -D__OPENMP -D__FFTW -D__MPI  -I/home/pooja/q-e-qe-6.2.0//include -I/home/pooja/q-e-qe-6.2.0//FoX/finclude -I../include/ -I../../iotk/src -I../../Modules -I../../FFTXlib -I../../LAXlib -I../../UtilXlib -I../../KS_Solvers/Davidson -I../../KS_Solvers/CG -I../../dft-d3/ -c setlocal.f90
f951: Warning: Nonexistent include directory ‘../include/’ [-Wmissing-include-dirs]
mpif90 -O3 -g -fopenmp -x f95-cpp-input -fopenmp -D__OPENMP -D__FFTW -D__MPI  -I/home/pooja/q-e-qe-6.2.0//include -I/home/pooja/q-e-qe-6.2.0//FoX/finclude -I../include/ -I../../iotk/src -I../../Modules -I../../FFTXlib -I../../LAXlib -I../../UtilXlib -I../../KS_Solvers/Davidson -I../../KS_Solvers/CG -I../../dft-d3/ -c setup.f90
f951: Warning: Nonexistent include directory ‘../include/’ [-Wmissing-include-dirs]
mpif90 -O3 -g -fopenmp -x f95-cpp-input -fopenmp -D__OPENMP -D__FFTW -D__MPI  -I/home/pooja/q-e-qe-6.2.0//include -I/home/pooja/q-e-qe-6.2.0//FoX/finclude -I../include/ -I../../iotk/src -I../../Modules -I../../FFTXlib -I../../LAXlib -I../../UtilXlib -I../../KS_Solvers/Davidson -I../../KS_Solvers/CG -I../../dft-d3/ -c spinor.f90
f951: Warning: Nonexistent include directory ‘../include/’ [-Wmissing-include-dirs]
mpif90 -O3 -g -fopenmp -x f95-cpp-input -fopenmp -D__OPENMP -D__FFTW -D__MPI  -I/home/pooja/q-e-qe-6.2.0//include -I/home/pooja/q-e-qe-6.2.0//FoX/finclude -I../include/ -I../../iotk/src -I../../Modules -I../../FFTXlib -I../../LAXlib -I../../UtilXlib -I../../KS_Solvers/Davidson -I../../KS_Solvers/CG -I../../dft-d3/ -c sph_ind.f90
f951: Warning: Nonexistent include directory ‘../include/’ [-Wmissing-include-dirs]
mpif90 -O3 -g -fopenmp -x f95-cpp-input -fopenmp -D__OPENMP -D__FFTW -D__MPI  -I/home/pooja/q-e-qe-6.2.0//include -I/home/pooja/q-e-qe-6.2.0//FoX/finclude -I../include/ -I../../iotk/src -I../../Modules -I../../FFTXlib -I../../LAXlib -I../../UtilXlib -I../../KS_Solvers/Davidson -I../../KS_Solvers/CG -I../../dft-d3/ -c stop_run.f90
f951: Warning: Nonexistent include directory ‘../include/’ [-Wmissing-include-dirs]
mpif90 -O3 -g -fopenmp -x f95-cpp-input -fopenmp -D__OPENMP -D__FFTW -D__MPI  -I/home/pooja/q-e-qe-6.2.0//include -I/home/pooja/q-e-qe-6.2.0//FoX/finclude -I../include/ -I../../iotk/src -I../../Modules -I../../FFTXlib -I../../LAXlib -I../../UtilXlib -I../../KS_Solvers/Davidson -I../../KS_Solvers/CG -I../../dft-d3/ -c stres_cc.f90
f951: Warning: Nonexistent include directory ‘../include/’ [-Wmissing-include-dirs]
mpif90 -O3 -g -fopenmp -x f95-cpp-input -fopenmp -D__OPENMP -D__FFTW -D__MPI  -I/home/pooja/q-e-qe-6.2.0//include -I/home/pooja/q-e-qe-6.2.0//FoX/finclude -I../include/ -I../../iotk/src -I../../Modules -I../../FFTXlib -I../../LAXlib -I../../UtilXlib -I../../KS_Solvers/Davidson -I../../KS_Solvers/CG -I../../dft-d3/ -c stres_ewa.f90
f951: Warning: Nonexistent include directory ‘../include/’ [-Wmissing-include-dirs]
mpif90 -O3 -g -fopenmp -x f95-cpp-input -fopenmp -D__OPENMP -D__FFTW -D__MPI  -I/home/pooja/q-e-qe-6.2.0//include -I/home/pooja/q-e-qe-6.2.0//FoX/finclude -I../include/ -I../../iotk/src -I../../Modules -I../../FFTXlib -I../../LAXlib -I../../UtilXlib -I../../KS_Solvers/Davidson -I../../KS_Solvers/CG -I../../dft-d3/ -c stres_gradcorr.f90
f951: Warning: Nonexistent include directory ‘../include/’ [-Wmissing-include-dirs]
mpif90 -O3 -g -fopenmp -x f95-cpp-input -fopenmp -D__OPENMP -D__FFTW -D__MPI  -I/home/pooja/q-e-qe-6.2.0//include -I/home/pooja/q-e-qe-6.2.0//FoX/finclude -I../include/ -I../../iotk/src -I../../Modules -I../../FFTXlib -I../../LAXlib -I../../UtilXlib -I../../KS_Solvers/Davidson -I../../KS_Solvers/CG -I../../dft-d3/ -c stres_har.f90
f951: Warning: Nonexistent include directory ‘../include/’ [-Wmissing-include-dirs]
mpif90 -O3 -g -fopenmp -x f95-cpp-input -fopenmp -D__OPENMP -D__FFTW -D__MPI  -I/home/pooja/q-e-qe-6.2.0//include -I/home/pooja/q-e-qe-6.2.0//FoX/finclude -I../include/ -I../../iotk/src -I../../Modules -I../../FFTXlib -I../../LAXlib -I../../UtilXlib -I../../KS_Solvers/Davidson -I../../KS_Solvers/CG -
......
Note that I hace gcc 9.3.0 version alrrady installed.
Any kind of help is appreciated
Thanks and regards
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