[QE-users] time consuming band structure calculation for a supercell
Lorenzo Paulatto
paulatz at gmail.com
Sat Dec 12 18:01:15 CET 2020
> Aslo I have tried running the band calculation on different systems
> (local pc with 12 nodes) and HPC (with 36 and 72 nodes). Every time I
> have the same problem. I have tried QE 6.5 and 6.4 for this
> calculation all with same issue.
For comparison, I have here a calculation with 119 electrons, 10
k-points, 100 Ry kinetic energy cutoff. One SCF iteration takes about 5
seconds on 32 CPUs (2 nodes of a very old computing cluster that has
since been retired). From 120 to 190 electrons there should be around a
factor 4 of CPU times. But it would be easier to say which is the source
of the discrepancy if you sent your input and output files to teh list,
to have a look
cheers
>
> All the best,
> Zahra
>
>
>
>
> On Fri, Dec 11, 2020, 22:22 Lorenzo Paulatto <paulatz at gmail.com
> <mailto:paulatz at gmail.com>> wrote:
>
> Hello Zahra,
>
> if I understand correctly, you manage to do the scf calculation,
> but then the band calculation is very slow. The cost per k-point
> of nscf should be more or less the same as the cost per k-point of
> one scf iteration. If it is not, there is something wrong. One
> possible problem, is that ecutwfc is interpreted differently
> during nscf. A tight value (1.d-12 or less) may cause the
> threshold of diagonalization in nscf to become too small and very
> slow to converge. This should be fixed in v 6.7, but you can just
> increase ecutwfc in nscf if you're using a previous version.
>
> If not, it may be a problem with parallelism, i.e. running on too
> many CPUs or some proper human error like running with all the
> processes on the same computing node.
>
>
> cheers
>
> On 2020-12-11 19:25, Zahra Khatibi wrote:
>> Dear all,
>>
>> First of all, I hope everyone is safe and well in these crazy times.
>> I'm calculating the electronic band dispersion of a 2D
>> heterostructure with a 59 atom unit cell. This system is a small
>> bandgap (10-20 meV) semiconductor. The number of valence bands is
>> (valence electrons/2) 181. When I set 'nbnd' to 190, the band
>> structure calculation costs me 30 minutes for each k point on HPC
>> with 72 processors. This means that if I do a simple band
>> calculation for a high symmetry path with 100 points within, I
>> have to wait almost 50 hours! This even becomes worst when I try
>> to evaluate the band dispersion with SOC switched on (twice the
>> spin degenerate band calculation).
>> Since the band dispersion evaluation is the major part of our
>> study, I was wondering if there is a way around this problem,
>> like reducing the number of bands by only looking at energy
>> interval close to Fermi energy?
>> I could see that there are lots of papers and studies in the
>> literature with huge unit cells and heavy atoms that have
>> presented numerous band structures (using QE). So I really
>> appreciate it if you could help me here.
>>
>> Kind regards,
>> --
>> Z. Khatibi
>> School of Physics
>> Trinity College Dublin
>>
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