[QE-users] Fwd: Error while parsing atomic position card
Giovanni Cantele
giovanni.cantele at spin.cnr.it
Wed Sep 4 12:42:56 CEST 2019
I don’t know if this is the problem,
but if I copy and paste your ATOMIC_POSITIONS card, a hidden character shows up in the last
line (Co y coordinate). This i what I see in my text file:
2.127711552<202c>0
Try to delete it and rewrite without cut&paste
Giovanni
> On 4 Sep 2019, at 12:36, hamed asadi <hasadi at mail.kntu.ac.ir> wrote:
>
>
> Dear qe users;
>
> I'm trying to relax cobalt doped graphene (the input file is attached bellow) but after starting calculations the fallowing error appeared.
> could someone help me with this issue?
> %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
> task # 0
> from card_atomic_positions : error # 1
> Error while parsing atomic position card.
> %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
>
>
> &CONTROL
> calculation = 'relax' ,
> restart_mode = 'from_scratch' ,
> etot_conv_thr = 1.0E-8 ,
> forc_conv_thr = 1.0D-8 ,
> outdir='/root/Desktop/PROJECT/g22Co/out',
> pseudo_dir = '/root/Desktop/PROJECT/g22Co/pp',
> wf_collect=.true.
> tprnfor = .true.
> tstress = .true.
> verbosity= 'low'
> /
> &SYSTEM
> ibrav = 4,
> celldm(1) = 9.285,
> celldm(3) = 3.053,
> nbnd = 100,
> nat = 9 ,
> ntyp = 2 ,
> ecutwfc = 40 ,
> ecutrho = 400,
> occupations = 'smearing' ,
> degauss= 0.01 ,
> smearing= 'gaussian',
> /
> &ELECTRONS
> mixing_beta = 0.7
> conv_thr = 1.D-8 ,
> /
> &IONS
> ion_dynamics= 'bfgs'
>
> /
> &CELL
> cell_dynamics = 'bfgs' ,
> cell_factor = 2
> /
> ATOMIC_SPECIES
> C 12.0107 C.pbe-n-rrkjus_psl.0.1.UPF
> Co 58.9332 Co.pbe-spn-rrkjus_psl.0.3.1.UPF
> ATOMIC_POSITIONS (angstrom)
> C 1.2284272880 0.7093165930 7.5000000000
> C 0.0000725580 1.4185075120 7.5000000000
> C 0.0000574330 2.8369155920 7.5000000000
> C -1.2282972970 3.5461065110 7.5000000000
> C 3.6851669970 0.7093165930 7.5000000000
> C 2.4568122670 1.4185075120 7.5000000000
> C 2.4567971420 2.8369155920 7.5000000000
> C 1.2284424120 3.5461065110 7.5000000000
> Co 1.2284348500 2.1277115520 10.5000000000
> K_POINTS {automatic}
> 8 8 1 0 0 0
>
> Best regards,
> Hamed Asadi,
> KN Toosi university of technology
> +989126193984
>
>
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--
Giovanni Cantele, PhD
CNR-SPIN
c/o Dipartimento di Fisica
Universita' di Napoli "Federico II"
Complesso Universitario M. S. Angelo - Ed. 6
Via Cintia, I-80126, Napoli, Italy
e-mail: giovanni.cantele at spin.cnr.it
gcantele at gmail.com
Phone: +39 081 676910
Skype contact: giocan74
Web page: https://sites.google.com/view/giovanni-cantele
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