[QE-users] pw_readschema_file failed retrieving input info from xml file ph.x using grid in qe-6.3-bkp and 2D cutoff
Pietro Davide Delugas
pdelugas at sissa.it
Wed Mar 27 16:02:09 CET 2019
Yes you are right.
reduce_io shouldn't be used anymore in ph.x input
Pietro
On 03/26/2019 05:11 PM, Raphael Longuinhos Monteiro Lobato wrote:
> Hi,
>
> On 3/26/19 1:02 PM, Pietro Davide Delugas wrote:
>> sorry are you still talking of ph.x with grid as in the beginning of
>> the thread or ph.x in general ?
> I guess (maybe, I wrong about it) it is for both cases, as the wfcs
> and bands computed when ph.x calls pw.x, data necessary for
> perturbation, are not saved in disk (in /scratch/_ph0/), nor in RAM
> (or maybe, it is in the RAM, but the codes looks for data in disk).
>
> Best,
>>
>>
>> On 03/26/2019 04:39 PM, Raphael Longuinhos Monteiro Lobato wrote:
>>> Hi,
>>>
>>>
>>> On 3/26/19 11:26 AM, Pietro Davide Delugas wrote:
>>>> I don't know whether the fact that the restart does not work with
>>>> reduce_io = .true. may be considered as a bug or as a feature.
>>> But as it is, I guess there is no way to use the reduce_io true. In
>>> my case, there is no recover = .true. (a restart) in the input:
>>>
>>> ph0
>>> &inputph
>>> prefix='test',
>>> reduce_io = .true.
>>> trans =.true.
>>> outdir='scratch',
>>> fildyn='test.dyn',
>>> /
>>> 0.009443 0.016356 0.000000
>>>
>>> And the output (main parts, I guess):
>>> Program PHONON v.6.4 starts on 26Mar2019 at 9:33: 7
>>> Reading data from directory:
>>> scratch/acnl1.save/
>>> ----2D----2D----2D----2D----2D----2D----2D----2D----2D----2D----2D----2D
>>>
>>> The code is running with the 2D cutoff
>>> Calculation of q = 0.0094430 0.0163560 0.0000000
>>> Subspace diagonalization in iterative solution of the
>>> eigenvalue problem:
>>> a serial algorithm will be used
>>> Title:
>>> ph0
>>> The potential is recalculated from file :
>>> scratch/_ph0/acnl1.save/charge-density
>>>
>>> Starting wfcs are 16 atomic wfcs
>>> End of band structure calculation
>>> ph0
>>> Computing dynamical matrix for
>>> q = ( 0.0094430 0.0163560 0.0000000 )
>>> Error in routine openfilq (1):
>>> file acnl1.wfc not found
>>>
>>> When commenting the reduce_io, all goes normal; it continues the
>>> "Computing dynamical matrix for" and computes the phonon frequencies.
>>>
>>> Best,
>>>>
>>>> In the second case we should warn the user about it in the
>>>> documentation
>>>>
>>>>
>>>> On 03/26/2019 02:58 PM, Raphael Longuinhos Monteiro Lobato wrote:
>>>>> Hi,
>>>>>
>>>>> On 3/26/19 10:32 AM, Pietro Davide Delugas wrote:
>>>>>> sorry but your message is painfully impervious ...
>>>>> Sorry ...
>>>>>>
>>>>>> do I understand correctly that at the moment, the only issue
>>>>>> is that at restart ph fails when the reduce_io flag is set to true.
>>>>>> Is it right ?
>>>>> Yes, because when the reduce_io is true, the code do not save the
>>>>> bands and wfcs in the RAM, and the dfpt step ends with
>>>>>
>>>>> Error in routine openfilq (1):
>>>>> file acnl1.wfc not found
>>>>>
>>>>> After recalculate the bands, in the part
>>>>> The potential is recalculated from file :
>>>>> scratch/_ph0/acnl1.save/charge-density
>>>>>
>>>>> there is no:
>>>>> Writing output data file acnl1.save/
>>>>>
>>>>> As there is when the reduce io is false.
>>>>>
>>>>> Best,
>>>>>
>>>>>> Pietro
>>>>>>
>>>>>> On 03/26/2019 02:16 PM, Raphael Longuinhos Monteiro Lobato wrote:
>>>>>>> Hi,
>>>>>>>
>>>>>>> I just compiled the q-e-dev to try the changes from
>>>>>>> https://gitlab.com/QEF/q-e/issues/102
>>>>>>>
>>>>>>> It appears some things are missing (could be may fault). The scf
>>>>>>> (wf_collect false, 2D) wrote the wfcs, xml and bands on scratch.
>>>>>>> The ph0(reduce_io true, single-q out Gamma) created the phsave
>>>>>>> and save in _ph0, and copied only charge.dat to _ph0/save; no
>>>>>>> wfcs, nor xml in _ph0.In the phout, there is no "failed
>>>>>>> retrieving info from xml", it found the bands in scratch/save
>>>>>>> and printed (reading from /scratch/xml? as there is no xml in
>>>>>>> _ph0?) it is a 2D calc. It built the pot from _ph0/save (the
>>>>>>> charge.dat is there) did the scf, but forgot to write the wfcs
>>>>>>> from this scf (and apparently, did not stored it on RAM) ...
>>>>>>> going on, the dfpt step could not find the .wfc (is it a miss
>>>>>>> behave of the reduce io flag? previously, in a single
>>>>>>> calculation with reduce io flag it did not happen). I repeated
>>>>>>> the ph0 with the reduce io flag commented, and as results: the
>>>>>>> wfc are in _ph0, the xml in _ph0/save, after the phx calls pwx
>>>>>>> to calc the bands it wrote it, and the dfpt now finds the wfcs.
>>>>>>>
>>>>>>> Best,
>>>>>>
>>>>>>
>>>>>
>>>>
>>>
>>
>
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