[QE-users] Keep the symmetry during a calculation
Lorenzo Paulatto
paulatz at gmail.com
Thu Nov 29 20:00:36 CET 2018
> Okay, thanks for your mail.
> I tried to check and recompile again and getting this error message:
> *move_ions.f90:127: undefined reference to `remake_cell_'*
Why don't you just take the entire code modified by me and use that
instead? Just grab it with the command
git clone https://gitlab.com/paulatz/q-e.git qe-lp
which will take the code an put it in directory qe-lp, than just move
into it, and ./configure && make as usual.
On 11/29/18 3:30 PM, Isaiah Moses wrote:
> *
> *
> I'm grateful for your help.
> Isaiah
>
> On Thu, Nov 29, 2018 at 4:07 AM Lorenzo Paulatto <paulatz at gmail.com
> <mailto:paulatz at gmail.com>> wrote:
>
> Hello Isaiah,
> The modified code should print quite a few new linessl in the
> output, with the new celldm values and the modified cell. If you
> don't see those, it means that either you did non change move_ions
> correctly (send me the file) or that you did not recompile the code.
>
> Regards
>
> --
> Lorenzo Paulatto
> Written on a virtual keyboard with real fingers
>
> On Thu, 29 Nov 2018, 04:12 Isaiah Moses <imoses87 at gmail.com
> <mailto:imoses87 at gmail.com> wrote:
>
> Hi,
>
> With the two-line patch applied to move_ions.f90, there seems
> not to be a difference from the result obtained without the change.
>
> Here is my input:
>
> &CONTROL
> calculation='vc-relax',
> outdir='temp',
> prefix='LiT1a',
> pseudo_dir='/home/imoses/pseudo/',
> verbosity='low',
> nstep = 200000
> /
> &system ! // aflow
> ibrav=7, ! // free
> nat=16, ! // a.atoms.size()
> ntyp=3 ! // a.num_each_type.size()
> A = 6.1
> !B = 6.1
> C = 6.1
> ecutwfc=150,
> occupations='smearing',
> smearing='mv',
> degauss=0.005d0,
> /
> &ELECTRONS
> conv_thr=1d-6,
> mixing_beta=0.4d0,
> /
> &ions
> /
> &cell
> press_conv_thr = 0.5D0
> press = 0.D0
> cell_dynamics = 'bfgs'
> cell_factor = 8
> /
> ATOMIC_SPECIES
> Li 6.9400d0 Li.pbe-mt_fhi.UPF
> Ti 47.867d0 Ti.pbe-mt_fhi.UPF
> O 15.999d0 O.pbe-mt_fhi.UPF
>
>
> OUTPUT
> the vc-relaxed geometry:
>
> CELL_PARAMETERS (alat= 11.52732941)
> 0.545360366 -0.680208816 0.546138738
> 0.545925798 0.680865775 0.545533600
> -0.482432298 -0.680038442 0.482482441
>
> ATOMIC_POSITIONS (crystal)
> Li 0.375000000 0.625000000 0.250000000
> Li 0.375000000 0.125000000 0.750000000
> Li 0.875000000 0.625000000 0.250000000
> Li 0.375000000 0.625000000 0.750000000
> O 0.642247701 0.416895441 0.762212185
> O 0.654820798 0.904654395 0.261942964
> O 0.654540137 0.904803229 0.737880733
> O 0.167126429 0.892250195 0.237885306
> O 0.095179202 0.345345605 0.238057036
> O 0.107752299 0.833104559 0.737787815
> O 0.095459863 0.345196771 0.762119267
> O 0.582873571 0.357749805 0.262114694
> Ti 0.875000000 0.125000000 0.250000000
> Ti 0.875000000 0.625000000 0.750000000
> Ti 0.375000000 0.125000000 0.250000000
> Ti 0.875000000 0.125000000 0.750000000
> End final coordinates
>
>
> Thanks for the help,
> Isaiah
>
> On Mon, Nov 26, 2018 at 4:06 AM Lorenzo Paulatto
> <paulatz at gmail.com <mailto:paulatz at gmail.com>> wrote:
>
> > But I'm not sure *PW/tools/cell2ibrav.f90*
> > I tried to recompile with and without adding
> *PW/tools/cell2ibrav.f90*
>
> Hello,
> do not include that file at all, it's an external tool
> that's not used
> here. Just apply the two-line patch to move_ions.f90
>
> cheers
>
> --
> Lorenzo Paulatto - Paris
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>
>
> --
> Isaiah Abu Moses
> Graduate Student
> Physics Department
> Central Michigan University
> Mt. Pleasant, MI 48859
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>
> --
> Isaiah Abu Moses
> Graduate Student
> Physics Department
> Central Michigan University
> United States
>
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--
Lorenzo Paulatto - Paris
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