[Pw_forum] How to install QE on mac
PRATIK DAS
pratikdas63 at gmail.com
Sun Apr 30 17:17:16 CEST 2017
Dear sir,
I am trying to install QE on my mac. But every time it failed with the
following libiotk error. I am attaching the error messages herewith.
Please let me know where I am doing wrong.
ERROR MESSAGE:
Last login: Sun Apr 30 18:55:11 on ttys000
Pratiks-MacBook-Air:~ pratikkumardas$ cd Desktop/espresso-5.1.2/
Pratiks-MacBook-Air:espresso-5.1.2 pratikkumardas$
Pratiks-MacBook-Air:espresso-5.1.2 pratikkumardas$
Pratiks-MacBook-Air:espresso-5.1.2 pratikkumardas$ ls
COUPLE README espresso-5.1.2
CPV S3DE espresso-5.1.2.tar.gz
Doc archive flib
License bin include
Makefile clib install
Modules configure make.sys
PP dev-tools pseudo
PW environment_variables upftools
Pratiks-MacBook-Air:espresso-5.1.2 pratikkumardas$ ./configure
checking build system type... i386-apple-darwin15.5.0
detected architecture... mac686
checking for ifort... no
checking for gfortran... gfortran
configure: WARNING: using cross tools not prefixed with host triplet
checking for Fortran compiler default output file name... a.out
checking whether the Fortran compiler works... yes
checking whether we are cross compiling... yes
checking for suffix of executables...
checking for suffix of object files... o
checking whether we are using the GNU Fortran compiler... yes
checking whether gfortran accepts -g... no
checking for Fortran flag to compile .f90 files... none
checking for mpif90... no
checking for gfortran... gfortran
checking whether we are using the GNU Fortran compiler... yes
checking whether gfortran accepts -g... no
checking version of gfortran... gfortran 4.2.3
setting F90... gfortran
setting MPIF90... gfortran
checking for cc... cc
checking whether we are using the GNU C compiler... yes
checking whether cc accepts -g... yes
checking for cc option to accept ISO C89... none needed
setting CC... cc
checking how to run the C preprocessor... cc -E
checking for grep that handles long lines and -e... /usr/bin/grep
checking for egrep... /usr/bin/grep -E
checking for ANSI C header files... yes
checking for sys/types.h... yes
checking for sys/stat.h... yes
checking for stdlib.h... yes
checking for string.h... yes
checking for memory.h... yes
checking for strings.h... yes
checking for inttypes.h... yes
checking for stdint.h... yes
checking for unistd.h... yes
checking size of int *... 8
checking malloc.h usability... no
checking malloc.h presence... no
checking for malloc.h... no
checking for gfortran... gfortran
checking whether we are using the GNU Fortran 77 compiler... yes
checking whether gfortran accepts -g... no
setting F77... gfortran
using F90... gfortran
setting FFLAGS... -O3 -g
setting F90FLAGS... $(FFLAGS) -x f95-cpp-input
setting FFLAGS_NOOPT... -O0 -g
setting CFLAGS... -O3
setting CPP... cpp
setting CPPFLAGS... -P -C -traditional
setting LD... gfortran
setting LDFLAGS... -g -pthread
setting AR... ar
setting ARFLAGS... ruv
checking whether make sets $(MAKE)... yes
checking whether Fortran files must be preprocessed... no
checking how to get verbose linking output from gfortran... -v
checking for Fortran 77 libraries of gfortran...
-L/usr/local/lib/gcc/i686-apple-darwin8/4.2.3
-L/usr/local/lib/gcc/i686-apple-darwin8/4.2.3/../../.. -lgfortranbegin
-lgfortran
checking for dummy main to link with Fortran 77 libraries... none
checking for Fortran 77 name-mangling scheme... unknown
configure: WARNING: unknown Fortran name-mangling scheme
checking for library containing dgemm... no
in /usr/local/lib: checking for library containing dgemm... no
checking for library containing dgemm... no
in /usr/local/lib: checking for library containing dgemm... no
checking for library containing dspev... no
in /usr/local/lib: checking for library containing dspev... no
setting BLAS_LIBS...
/Users/pratikkumardas/Desktop/espresso-5.1.2/BLAS/blas.a
setting LAPACK_LIBS...
/Users/pratikkumardas/Desktop/espresso-5.1.2/lapack-3.2/lapack.a
checking for library containing dfftw_execute_dft... no
in /usr/local/lib: checking for library containing dfftw_execute_dft... no
setting FFT_LIBS...
setting MASS_LIBS...
checking for library containing mpi_init... no
setting MPI_LIBS...
checking for library containing mpi_init... (cached) no
setting SCALAPACK_LIBS...
setting DFLAGS... -D__GFORTRAN -D__STD_F95 -D__FFTW
setting IFLAGS... -I../include
setting FDFLAGS... $(DFLAGS)
checking for ranlib... ranlib
setting RANLIB... ranlib -c
checking for wget... no
checking for curl... curl -o
setting WGET... curl -o
configure: creating ./config.status
config.status: creating include/fft_defs.h
config.status: creating make.sys
config.status: creating configure.msg
config.status: creating install/make_wannier90.sys
config.status: creating install/make_blas.inc
config.status: creating install/make_lapack.inc
config.status: creating include/c_defs.h
config.status: include/c_defs.h is unchanged
--------------------------------------------------------------------
ESPRESSO can take advantage of several optimized numerical libraries
(essl, fftw, mkl...). This configure script attempts to find them,
but may fail if they have been installed in non-standard locations.
If a required library is not found, the local copy will be compiled.
The following libraries have been found:
BLAS_LIBS=/Users/pratikkumardas/Desktop/espresso-5.1.2/BLAS/blas.a
LAPACK_LIBS=/Users/pratikkumardas/Desktop/espresso-5.1.2/lapack-3.2/lapack.a
FFT_LIBS=
Please check if this is what you expect.
If any libraries are missing, you may specify a list of directories
to search and retry, as follows:
./configure LIBDIRS="list of directories, separated by spaces"
Parallel environment not detected \(is this a parallel machine?\).\
Configured for compilation of serial executables.
For more info, read the ESPRESSO User's Guide (Doc/users-guide.tex).
--------------------------------------------------------------------
configure: success
Pratiks-MacBook-Air:espresso-5.1.2 pratikkumardas$
Pratiks-MacBook-Air:espresso-5.1.2 pratikkumardas$
Pratiks-MacBook-Air:espresso-5.1.2 pratikkumardas$
Pratiks-MacBook-Air:espresso-5.1.2 pratikkumardas$
Pratiks-MacBook-Air:espresso-5.1.2 pratikkumardas$ make all
test -d bin || mkdir bin
cd install ; /Library/Developer/CommandLineTools/usr/bin/make -f
extlibs_makefile libiotk
if test ! -d ../S3DE; then \
(gzip -dc ../archive/iotk-1.2.beta.tar.gz | (cd ../; tar -xvf -)) ; \
if test -e Makefile_iotk; then \
(cp Makefile_iotk ../S3DE/iotk/src/Makefile); fi; \
if test -e iotk_config.h; then \
(cp iotk_config.h ../S3DE/iotk/include/iotk_config.h); fi; fi
cd ../S3DE/iotk/src; /Library/Developer/CommandLineTools/usr/bin/make
lib+util;
gfortran -O3 -g -x f95-cpp-input -D__GFORTRAN -D__STD_F95 -D__FFTW
-I../include -c iotk_base.f90
*/var/folders/2g/571f7z014fz63skqj3gpqtcc0000gn/T//cc7XFxV2.s:1:9: **error:
**unsupported directive '.stabs'*
.stabs
"/Users/pratikkumardas/Desktop/espresso-5.1.2/S3DE/iotk/src/",100,0,7,Ltext0
* ^*
*/var/folders/2g/571f7z014fz63skqj3gpqtcc0000gn/T//cc7XFxV2.s:2:9: **error:
**unsupported directive '.stabs'*
.stabs "iotk_base.f90",100,0,7,Ltext0
* ^*
*/var/folders/2g/571f7z014fz63skqj3gpqtcc0000gn/T//cc7XFxV2.s:5:9: **error:
**unsupported directive '.stabs'*
.stabs "gcc2_compiled.",60,0,0,0
* ^*
*/var/folders/2g/571f7z014fz63skqj3gpqtcc0000gn/T//cc7XFxV2.s:55:9: **error:
**unsupported directive '.stabs'*
.stabs
"iotk_error_pool:G(0,1)=ar(0,2)=r(0,2);-2147483648;2147483647;;0;99;(0,3)=xsiotk_error:",32,0,240,0
* ^*
*/var/folders/2g/571f7z014fz63skqj3gpqtcc0000gn/T//cc7XFxV2.s:56:9: **error:
**unsupported directive '.stabs'*
.stabs "int4:t(0,2)",128,0,0,0
* ^*
*/var/folders/2g/571f7z014fz63skqj3gpqtcc0000gn/T//cc7XFxV2.s:57:9: **error:
**unsupported directive '.stabs'*
.stabs
"iotk_error:T(0,3)=s24str:(0,4)=xsarray1_unknown:,0,192;;",128,0,0,0
* ^*
*/var/folders/2g/571f7z014fz63skqj3gpqtcc0000gn/T//cc7XFxV2.s:58:9: **error:
**unsupported directive '.stabs'*
.stabs "iotk_indent:G(0,2)",32,0,284,0
* ^*
*/var/folders/2g/571f7z014fz63skqj3gpqtcc0000gn/T//cc7XFxV2.s:59:9: **error:
**unsupported directive '.stabs'*
.stabs "iotk_error_warn_overflow:G(0,5)=@s32;-16;",32,0,293,0
* ^*
*/var/folders/2g/571f7z014fz63skqj3gpqtcc0000gn/T//cc7XFxV2.s:60:9: **error:
**unsupported directive '.stabs'*
.stabs "logical4:t(0,5)",128,0,0,0
* ^*
*/var/folders/2g/571f7z014fz63skqj3gpqtcc0000gn/T//cc7XFxV2.s:61:9: **error:
**unsupported directive '.stabs'*
.stabs "iotk_error_pool_used:G(0,6)=ar(0,2);0;99;(0,5)",32,0,246,0
* ^*
*/var/folders/2g/571f7z014fz63skqj3gpqtcc0000gn/T//cc7XFxV2.s:62:9: **error:
**unsupported directive '.stabs'*
.stabs "iotk_error_pool_order:G(0,7)=ar(0,2);0;99;(0,2)",32,0,252,0
* ^*
*/var/folders/2g/571f7z014fz63skqj3gpqtcc0000gn/T//cc7XFxV2.s:63:9: **error:
**unsupported directive '.stabs'*
.stabs "iotk_error_unit:G(0,2)",32,0,265,0
* ^*
*/var/folders/2g/571f7z014fz63skqj3gpqtcc0000gn/T//cc7XFxV2.s:64:9: **error:
**unsupported directive '.stabs'*
.stabs "iotk_getline_buffer:G(0,2)",32,0,274,0
* ^*
*/var/folders/2g/571f7z014fz63skqj3gpqtcc0000gn/T//cc7XFxV2.s:65:9: **error:
**unsupported directive '.stabs'*
.stabs "iotk_linlen:G(0,2)",32,0,281,0
* ^*
*/var/folders/2g/571f7z014fz63skqj3gpqtcc0000gn/T//cc7XFxV2.s:66:9: **error:
**unsupported directive '.stabs'*
.stabs "iotk_maxindent:G(0,2)",32,0,287,0
* ^*
*/var/folders/2g/571f7z014fz63skqj3gpqtcc0000gn/T//cc7XFxV2.s:67:9: **error:
**unsupported directive '.stabs'*
.stabs "iotk_output_unit:G(0,2)",32,0,267,0
* ^*
*/var/folders/2g/571f7z014fz63skqj3gpqtcc0000gn/T//cc7XFxV2.s:68:9: **error:
**unsupported directive '.stabs'*
.stabs "iotk_unitmax:G(0,2)",32,0,263,0
* ^*
*/var/folders/2g/571f7z014fz63skqj3gpqtcc0000gn/T//cc7XFxV2.s:69:9: **error:
**unsupported directive '.stabs'*
.stabs "iotk_unitmin:G(0,2)",32,0,261,0
* ^*
*/var/folders/2g/571f7z014fz63skqj3gpqtcc0000gn/T//cc7XFxV2.s:71:9: **error:
**unsupported directive '.stabs'*
.stabs "",100,0,0,Letext0
* ^*
make[2]: *** [iotk_base.o] Error 1
make[1]: *** [libiotk] Error 2
make: *** [libiotk] Error 2
Pratiks-MacBook-Air:espresso-5.1.2 pratikkumardas$
Thank you in advance.
Best regards
Pratik
************************Pratik Kr. Das*
Senior Research Fellow (DST-INSPIRE)
High Pressure and Temperature Lab
Faculty of Science
Jadavpur University
Kolkata 700032
Ph No. *+91-9674162216*
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