[Pw_forum] monoclinic system number of atom generated is incorrect
Lorenzo Donà
lorechimica91 at hotmail.it
Wed Jun 8 21:08:15 CEST 2016
Dear Paolo
Thanks now it works
Sorry but i have another question:
where or how can i find the Bravais lattice vectors for a system??
Is there some tools or web site??
Thanks a lot again.
> Il giorno 08 giu 2016, alle ore 20:06, Paolo Giannozzi <p.giannozzi at gmail.com> ha scritto:
>
> You should first of all figure out if your data is for "unique axis b"
> or "unique axis c". I think it is for the former case, so you should
> specifiy "uniqueb=.true.". See also the input documentation of pw.x.
> You also need to know the Wyckoff sites for your crystal:
> http://www.cryst.ehu.es/cgi-bin/cryst/programs/nph-wp-list
>
> Paolo
>
> On Wed, Jun 8, 2016 at 11:17 AM, Lorenzo Donà <lorechimica91 at hotmail.it> wrote:
>> Good morning to everyone
>> I am performing this calculation on a monoclinic system: Symmetry
>> information:
>> Monoclinic crystal system.
>> Space group number : 15
>> Hall symbol : -I 2ya
>> Hermann-Mauguin symbol : I12/a1
>> Symmetry equivalent sites:
>> 1 x, y, z
>> 2 -x, -y, -z
>> 3 -x+1/2, y, -z
>> 4 x+1/2, -y, z
>>
>> Lattice parameters:
>> a b c
>> 23.8688000 11.1968000 7.8252000
>> alpha beta gamma
>> 90.0000000 95.4750000 90.0000000
>> Bravais lattice vectors :
>> 1.0000000 0.0000000 0.0000000
>> 0.0000000 0.4690977 0.0000000
>> 0.4843601 0.2345489 0.1631733
>> in which the number of atom is 72 but in my pw.x output I found 80 atoms.
>> this is my input:
>>
>> &control
>>
>> calculation='relax'
>>
>> pseudo_dir='/Users/lorenzodona/Downloads/espresso-5.4.0/pseudo/'
>>
>> verbosity= high,
>>
>> /
>>
>> &system
>>
>> a= 23.8688, b= 11.1968, c= 7.8252, cosab= 0.417083157, space_group = 15,
>>
>> nat= 20, ntyp= 4,
>>
>> ecutwfc =15.0,
>>
>> rhombohedral= .false.
>>
>> /
>>
>> &electrons
>>
>> diagonalization='david'
>>
>> mixing_beta = 0.7
>>
>> conv_thr= 1.0e-7
>>
>> /
>>
>> &ions
>>
>> ion_dynamics='bfgs'
>>
>> /
>>
>> ATOMIC_SPECIES
>>
>> Zr 91.224 Zr.pbe-mt_fhi.UPF
>>
>> C 12.010 C.pbe-mt_fhi.UPF
>>
>> O 16.00 O.pbe-mt_fhi.UPF
>>
>> H 1.00 H.pbe-mt_fhi.UPF
>>
>> ATOMIC_POSITIONS crystal_sg
>>
>> Zr 0.8055700 0.2260400 0.1404400
>>
>> O 0.7837400 0.2764700 0.3778600
>>
>> O 0.7887800 0.0352700 0.0965300
>>
>> O 0.8863700 0.2930100 0.0648300
>>
>> O 0.7894200 0.4193200 0.0923400
>>
>> O 0.8721000 0.1295600 -0.7030000
>>
>> C 0.8994700 0.1401400 0.4427600
>>
>> C 0.9514400 0.0679000 0.4731700
>>
>> C 0.9682300 -0.0035900 0.3401200
>>
>> C 0.0168300 -0.0717400 0.3668600
>>
>> C -0.2965000 -0.2104000 -0.0790000
>>
>> C -0.7034500 -0.6656900 0.0788000
>>
>> H 0.9426100 -0.0042000 0.2174500
>>
>> H 0.0307000 0.8716500 0.2661000
>>
>> H 0.3320300 0.3845300 0.1396500
>>
>> H 0.6681300 0.8400300 0.8596200
>>
>> C 0.7500000 0.4711800 0.0000000
>>
>> C 0.7500000 0.9838200 0.0000000
>>
>> C 0.7500000 0.8516100 0.0000000
>>
>> C 0.7500000 0.6036500 0.0000000
>>
>>
>> Can you tell me where I am making a mistake??
>> thanks a lot
>> dearly
>> lorenzo
>>
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>
>
>
> --
> Paolo Giannozzi, Dip. Scienze Matematiche Informatiche e Fisiche,
> Univ. Udine, via delle Scienze 208, 33100 Udine, Italy
> Phone +39-0432-558216, fax +39-0432-558222
>
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