[Pw_forum] dfti error in cg minimization (cp.x)
Sencer Selcuk
sselcuk at princeton.edu
Tue Jul 12 16:55:23 CEST 2016
Hi Paolo,
I sent this email a few days ago, along with the input file and
pseudopotentials. It was rejected because of size. I am resending with
only the input file:
The system I am simulating is a bit big, so I didn't share it.
Unfortunately I was not able to reproduce the error with a smaller
system. Neither the problem is about the system itself -I can run the
dynamics using the usual sd/damp/verlet way.
I am attached the relevant files anyway, in case someone would be
interested in help me spotting the problem.
Best,
Sencer
On Fri, Jul 8, 2016 at 3:44 AM, Paolo Giannozzi <p.giannozzi at gmail.com>
wrote:
> Please provide an example that can be run
>
> Paolo
>
> On Thu, Jul 7, 2016 at 11:33 PM, Sencer Selcuk
> <sselcuk at princeton.edu> wrote:
>> Dear all,
>>
>> I am trying to use 'cg' for electronic minimization in cp.x
>> (version 5.4.0).
>> I have these in the &electrons section of my input file:
>>
>> electron_dynamics = 'cg'
>> tcg = .TRUE.
>> orthogonalization = 'Gram-Schmidt'
>> passop = 0.1
>>
>>
>> However, the program dies after saying "PERFORMING CONJUGATE
>> GRADIENT
>> MINIMIZATION OF EL. STATES" with the following error message:
>>
>> Error in routine cft_1z (5):
>> stopped in DftiComputeBackward
>>
>>
>> I am using QE compiled with the FFT module of Intel MKL. However, I
>> tried
>> with FFTW3 and my calculation died, similarly with the following
>> error:
>>
>> *** Error in
>> `/global/homes/s/sselcuk/software/cori/espresso-fftw/bin/cp.x':
>> corrupted double-linked list: 0x00000000077c77d0 ***
>> *** Error in
>> `/global/homes/s/sselcuk/software/cori/espresso-fftw/bin/cp.x':
>> malloc(): smallbin double linked list corrupted: 0x00000000047c8b80
>> ***
>>
>>
>> and with the internal FFT engine, which died complaining:
>>
>> Rank 65 [Thu Jul 7 14:31:39 2016] [c0-0c2s15n2] Fatal error in
>> PMPI_Isend:
>> Other MPI error, error stack:
>> PMPI_Isend(161).....................: MPI_Isend(buf=0x7811e00,
>> count=48,
>> MPI_DOUBLE_COMPLEX, dest=26, tag=66, comm=0xc4000007,
>> request=0x7ffffffe64e8) failed
>> MPIDI_EagerContigIsend(607).........: failure occurred while
>> attempting to
>> send an eager message
>>
>>
>> I couldn't find any relevant information in the group, and would
>> appreciate
>> any help.
>>
>> Best,
>> Sencer
>> Postdoc @ Princeton University.
>>
>> _______________________________________________
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>> Pw_forum at pwscf.org
>> http://pwscf.org/mailman/listinfo/pw_forum
>
>
>
> --
> Paolo Giannozzi, Dip. Scienze Matematiche Informatiche e Fisiche,
> Univ. Udine, via delle Scienze 208, 33100 Udine, Italy
> Phone +39-0432-558216, fax +39-0432-558222
> _______________________________________________
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