[Pw_forum] (no subject)
Cecil Humphrey Botchway
humphrey2g4 at gmail.com
Sat Apr 30 20:44:47 CEST 2016
Hi There,
I have been trying to run a neb.x calculation with methanol bond breaking i
the zeolite micropore ( the system is composed of 120m atoms). I keep
getting the error below
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
task # 0
from rdiaghg : error # 818
S matrix not positive definite
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
This is how my input looks like
BEGIN
BEGIN_PATH_INPUT
&PATH
restart_mode = 'from_scratch'
string_method = 'neb',
nstep_path = 20,
ds = 2.D0,
opt_scheme = "broyden",
num_of_images = 7,
k_max = 0.3D0,
k_min = 0.2D0,
CI_scheme = "auto",
path_thr = 0.1D0,
/
END_PATH_INPUT
BEGIN_ENGINE_INPUT
&CONTROL
prefix = "TS1"
outdir = "./tmp/",
pseudo_dir = "/home/cbotchway/Cecil",
/
&SYSTEM
ibrav = 0,
nat = 120,
ntyp = 5,
ecutwfc = 40.0D0,
ecutrho = 240.0D0,
nspin = 2,
starting_magnetization = 0.5D0,
occupations = "smearing",
degauss = 0.03D0,
/
&ELECTRONS
conv_thr = 1.D-6,
mixing_beta = 0.2D0,
electron_maxstep =1000000,
/
&IONS
/
ATOMIC_SPECIES
O 15.99940 O.pbe-van_ak.UPF
Si 28.0855 Si.pbe-n-van.UPF
Al 26.98154 Al.pbe-n-van.UPF
H 1.00794 H.pbe-van_ak.UPF
C 12.0107 C.pbe-van_ak.UPF
BEGIN_POSITIONS
FIRST_IMAGE
ATOMIC_POSITIONS (alat)
O 6.226694422 1.600275419 2.184924354 0 0 0
O 12.708816022 13.234159993 5.738093626 0 0 0
O 12.828127437 1.545084085 5.281812015 0 0 0
O 12.876343333 12.656172642 2.211401393 0 0 0
O 6.186293741 13.313766071 1.799333749 0 0 0
O 6.443594281 1.023531891 5.767275456 0 0 0
O 6.337219443 12.703873910 5.357337611 0 0 0
O 12.941217779 0.939626460 1.796223732 0 0 0
O 15.607357361 8.418020996 5.628934880 0 0 0
I froze the structure of the zeolite by assigning the zeros leaving just
the adsorbates while increasing and decreasing the numbers of processor
cores from
8-16 and still encountered the same error. Any help or advice would be
appreciated.
Thank you in advance
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