[Pw_forum] [*] Re: [qe-gpu]
Filippo Spiga
spiga.filippo at gmail.com
Sat May 30 21:16:50 CEST 2015
I do not know how you create such situation with such errors appearing on your system. My only suggestion is to cancel everything in your current directory, download again both QE 5.1.2 and QE-GPU v14.10.0 and start from the beginning.
F
> On May 29, 2015, at 5:58 AM, Anubhav Kumar <kanubhav at iitk.ac.in> wrote:
>
> Dear Filippo
>
> Thank you very much for your fast reply.
> I rerun configure and make after clean as you suggested.But now i am
> getting the following error
>
> rdiaghg.f90:78.22:
>
> END SUBROUTINE rdiaghg
> 1
> Error: Expected label 'rdiaghg_compute' for END SUBROUTINE statement at (1)
> rdiaghg.f90:81:
>
> SUBROUTINE rdiaghg_compute( n, m, h, s, ldh, e, v )
> 1
> Error: Unclassifiable statement at (1)
> rdiaghg.f90:90.33:
>
> USE kinds, ONLY : DP
> 1
> Error: Unexpected USE statement at (1)
> rdiaghg.f90:91.39:
>
> USE mp, ONLY : mp_bcast
> 1
> Error: Unexpected USE statement at (1)
> rdiaghg.f90:92.66:
>
> USE mp_bands, ONLY : me_bgrp, root_bgrp, intra_bgrp_comm
> 1
> Error: Unexpected USE statement at (1)
> rdiaghg.f90:94.15:
>
> IMPLICIT NONE
> 1
> Error: Unexpected IMPLICIT NONE statement at (1)
> rdiaghg.f90:96.26:
>
> INTEGER, INTENT(IN) :: n, m, ldh
> 1
> Error: Symbol 'n' at (1) already has basic type of INTEGER
> rdiaghg.f90:100.30:
>
> REAL(DP), INTENT(INOUT) :: h(ldh,n), s(ldh,n)
> 1
> Error: Symbol 'h' at (1) already has basic type of REAL
> rdiaghg.f90:104.28:
>
> REAL(DP), INTENT(OUT) :: e(n)
> 1
> Error: Symbol 'e' at (1) already has basic type of REAL
> rdiaghg.f90:106.28:
>
> REAL(DP), INTENT(OUT) :: v(ldh,m)
> 1
> Error: Symbol 'v' at (1) already has basic type of REAL
> rdiaghg.f90:109.52:
>
> INTEGER :: i, j, lwork, nb, mm, info
> 1
> Error: Unexpected data declaration statement at (1)
> rdiaghg.f90:111.33:
>
> REAL(DP) :: abstol
> 1
> Error: Unexpected data declaration statement at (1)
> rdiaghg.f90:112.37:
>
> REAL(DP), PARAMETER :: one = 1_DP
> 1
> Error: Unexpected data declaration statement at (1)
> rdiaghg.f90:113.38:
>
> REAL(DP), PARAMETER :: zero = 0_DP
> 1
> Error: Unexpected data declaration statement at (1)
> rdiaghg.f90:114.45:
>
> INTEGER, ALLOCATABLE :: iwork(:), ifail(:)
> 1
> Error: Unexpected data declaration statement at (1)
> rdiaghg.f90:115.54:
>
> REAL(DP), ALLOCATABLE :: work(:), sdiag(:), hdiag(:)
> 1
> Error: Unexpected data declaration statement at (1)
> rdiaghg.f90:116.42:
>
> LOGICAL :: all_eigenvalues
> 1
> Error: Unexpected data declaration statement at (1)
> rdiaghg.f90:117.33:
>
> INTEGER, EXTERNAL :: ILAENV
> 1
> Error: Unexpected data declaration statement at (1)
> rdiaghg.f90:128.15:
>
> ALLOCATE( sdiag( n ) )
> 1
> Error: Allocate-object at (1) is neither a data pointer nor an allocatable
> varia ble
> rdiaghg.f90:130.25:
>
> sdiag(i) = s(i,i)
> 1
> Error: Unexpected STATEMENT FUNCTION statement at (1)
> rdiaghg.f90:149.15:
>
> ALLOCATE( work( lwork ) )
> 1
> Error: Allocate-object at (1) is neither a data pointer nor an allocatable
> varia ble
> rdiaghg.f90:172.18:
>
> ALLOCATE( iwork( 5*n ) )
> 1
> Error: Allocate-object at (1) is neither a data pointer nor an allocatable
> varia ble
> rdiaghg.f90:173.18:
>
> ALLOCATE( ifail( n ) )
> 1
> Error: Allocate-object at (1) is neither a data pointer nor an allocatable
> varia ble
> rdiaghg.f90:177.18:
>
> ALLOCATE( hdiag( n ) )
> 1
> Error: Allocate-object at (1) is neither a data pointer nor an allocatable
> varia ble
> rdiaghg.f90:179.28:
>
> hdiag(i) = h(i,i)
> 1
> Error: Unexpected STATEMENT FUNCTION statement at (1)
> Fatal Error: Error count reached limit of 25.
> make[1]: *** [rdiaghg.o] Error 1
> make[1]: Leaving directory `/home/anubhav/Downloads/espresso-5.1.2/PW/src'
> make: *** [pw-lib] Error 2
>
> Can you please help me out?
>
>
>
>
>
>
>> Dear Anubhav,
>>
>> make sure you clean properly before re-run configure and make
>>
>> make -f Makefile.gpu distclean
>> ./configure ...
>> make -f Makefile.gpu pw-gpu
>>
>> F
>>
>> On May 27, 2015, at 8:54 AM, kanubhav at iitk.ac.in wrote:
>>> Dear QE users
>>>
>>> I was configuring qe-gpu 14.10.0 with espresso-5.1.2 on ubuntu 14.04
>>> .Serial Configuration was successful, but when i run makefile, it gives
>>> me
>>> the following error
>>>
>>> /usr/bin/ld:
>>> /home/anubhav/Downloads/espresso-5.1.2/GPU/..//qe-magma/lib/libmagma.a(ztrevc3_mt.o):
>>> undefined reference to symbol '__cxa_pure_virtual@@CXXABI_1.3'
>>> //usr/lib/x86_64-linux-gnu/libstdc++.so.6: error adding symbols: DSO
>>> missing from command line
>>> collect2: error: ld returned 1 exit status
>>> make[1]: *** [pw-gpu.x] Error 1
>>> make[1]: Leaving directory
>>> `/home/anubhav/Downloads/espresso-5.1.2/GPU/PW'
>>> make: *** [pw-gpu] Error 2
>>>
>>> As suggested in one the mail, i configured qe-gpu without magma.Then
>>> after
>>> running make file, i am getting the following error
>>>
>>> ../Modules/libqemodgpu.a(cuda_init.o): In function `initcudaenv_':
>>> tmpxft_0000384c_00000000-3_cuda_init.cudafe1.cpp:(.text+0x8f0):
>>> undefined
>>> reference to `magma_init'
>>> ../Modules/libqemodgpu.a(cuda_init.o): In function `closecudaenv_':
>>> tmpxft_0000384c_00000000-3_cuda_init.cudafe1.cpp:(.text+0xa5a):
>>> undefined
>>> reference to `magma_finalize'
>>> libpwgpu.a(cdiaghg_gpu.o): In function `cdiaghg_gpu_':
>>> /home/anubhav/Downloads/espresso-5.1.2/GPU/PW/cdiaghg_gpu.f90:146:
>>> undefined reference to `magmaf_zhegvx_'
>>> collect2: error: ld returned 1 exit status
>>> make[1]: *** [pw-gpu.x] Error 1
>>> make[1]: Leaving directory
>>> `/home/anubhav/Downloads/espresso-5.1.2/GPU/PW'
>>> make: *** [pw-gpu] Error 2
>>> Please someone help me out
>>>
>>> Anubhav Kumar
>>> IITK
>>>
>>> _______________________________________________
>>> Pw_forum mailing list
>>> Pw_forum at pwscf.org
>>> http://pwscf.org/mailman/listinfo/pw_forum
>>
>> --
>> Mr. Filippo SPIGA, M.Sc.
>> http://fspiga.github.io ~ skype: filippo.spiga
>>
>> «Nobody will drive us out of Cantor's paradise.» ~ David Hilbert
>>
>> *****
>> Disclaimer: "Please note this message and any attachments are CONFIDENTIAL
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>> are not to be disclosed to anyone other than the addressee. Unauthorized
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>>
>>
>>
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>
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--
Mr. Filippo SPIGA, M.Sc.
http://fspiga.github.io ~ skype: filippo.spiga
«Nobody will drive us out of Cantor's paradise.» ~ David Hilbert
*****
Disclaimer: "Please note this message and any attachments are CONFIDENTIAL and may be privileged or otherwise protected from disclosure. The contents are not to be disclosed to anyone other than the addressee. Unauthorized recipients are requested to preserve this confidentiality and to advise the sender immediately of any error in transmission."
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