[Pw_forum] XSpectra and US or PAW pseudos?
Delphine Cabaret
delphine.cabaret at impmc.upmc.fr
Fri Aug 28 18:31:03 CEST 2015
Hello Adrian
You are right about the contradiction because I wrote v5.0.2 twice in
my email and I apologize for it (it was late). To be clear, it is the
version v.5.2.0. that contains a bug. Thus it is better to use the v5.0.2.
Regards
Delphine
Le 28/08/2015 12:34, Adrian Hühn a écrit :
> Hello Delphine,
>
> thanks for your quick reply! This seems to be a contradiction to my
> observations. Maybe I did not write this in detail, but I was only able
> to get sensible results when calculating diamond USPP spectra with
> v.5.0.2. The same setup fails with the recent v.5.2.0. To be more
> specific: Both PWscf and the XSspectra calculations run on both
> versions, but the data from "xanes.dat" is useless on the recent 5.2.0.
> I uploaded the setups.
> http://www.file-upload.net/download-10870211/diamondh_uspp_5.0.2.tar.gz.html
> http://www.file-upload.net/download-10870213/diamondh_uspp_5.2.0.tar.gz.html
>
> Concerning my problem with periclase or magnesium pseudopotentials (my
> last trials are with NC): do you think this could also trigger the
> segmentation fault?
> I recompiled QE 5.0.2 without parallelization (./configure
> --disable-parallel) but this does not make any difference.
>
> At I deeper look I can see, that the code fails at the same point,
> perhaps when "paw_recon(xiabs)" is accessed.
> espresso-5.0.2/XSpectra/src/xspectra.f90:461 or
> espresso-5.2.0/XSpectra/src/xspectra.f90:592
> [code]
> 456 !
> $$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$
> 457 ! Reads reconstruction files
> 458 !
> $$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$
>
> 459
> 460 CALL read_core_abs(filecore,core_wfn)
> 461 IF ( .NOT. paw_recon(xiabs)%gipaw_data_in_upf_file ) &
> ! SEGFAULT !
> 462 CALL read_recon ( filerecon(xiabs), xiabs, paw_recon(xiabs)
> ) !*apsi
> [\code]
>
>
>
> Am 28.08.2015 um 00:56 schrieb Delphine Cabaret:
>> Dear Adrian,
>>
>> Concerning your first question, v.5.0.2 contains a bug related to the
>> parallelization
>> that could be at the origin of the regression you observed.
>> This bug has been corrected in the version available on the SVN.
>> I suggest you to go on with the v.5.0.2 for the moment.
>>
>> Regards
>>
>> D. Cabaret
>>
>>
>> Le 27/08/2015 21:58, Adrian Hühn a écrit :
>>> Dear Developers and Users,
>>>
>>> when using XSpectra everything goes fine when go through the following
>>> tutorial:
>>> http://www.ictp.it/~rgebauer/Matteo_XAS.tar.gz
>>> going further I could nicely reproduce the experimental carbon K-edge
>>> X-ray absorption spectrum using PBE.
>>> I could also generate spectra using this US pseudopotential:
>>> http://theossrv1.epfl.ch/uploads/Main/NoBackup/pbe.0.3.1.tgz
>>> (of course it was also modified to generate the core-hole). Here seems
>>> to be a regression when using the latest version 5.2.0. At least I only
>>> got consistent results, when using v.5.0.2.
>>>
>>> Next I wanted to calculate the magnesium K-edge in Periclase. I tested
>>> the Mg pseudopotentials from the pslibraries, thereunder the NC and the
>>> USPP variants. BOTH lead to a segfault. I already messed with th
>>> generation parameters of the Mg pseudopotential and changed the
>>> r_paw(1)-parameter in the XSpectra input but no avail.
>>> I built QE with GCC 5.2 under Arch Linux on my local machine, but the
>>> problem applies at our cluster (using the Intel compiler) as well.
>>> Did I miss anything? The Inputs and results are added to the archives.
>>>
>>> I firstly planned to calculate Mg K-edge spectra of MgO2 species on a
>>> Au(111)-surface using PAW pseudopotentials, but I am willing to use USPP
>>> or NCPP if they work better with XSpectra.
>>>
>>> Regards
>>> Adrian Huehn
>>>
>>>
>>> Mulliken Institute for Theoretical Chemistry
>>> University of Bonn
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--
Delphine Cabaret
Maitre de Conférences
Sorbonne Universités
Université Pierre et Marie Curie (Paris 6)
Institut de Minéralogie, de Physique des Matériaux et de Cosmochimie (IMPMC)
4, place Jussieu, 75252 PARIS cedex 05
Aile 23-24, 4e étage, porte 427
Tel: 01 44 27 74 52
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