[Pw_forum] GPU serial compiling error

Reza Behjatmanesh-Ardakani reza_b_m_a at yahoo.com
Wed May 7 08:52:07 CEST 2014


Dear Users

I have compiled QE 5.0.2 with MPICH and intel composerxe parallel studio, and everything is OK.

Now, I am compiling QE-GPU-14.03.0. To do this, I started with GTX660Ti. I installed NVIDIA linux driver, and CUDA5.5. 

I configured GPU according to its help. It seems that it is OK. However, when I run following command, I get some errors (see Following section). Any help will be appreciated. I have also attache make.sys and makefile.gpu



=====================
Command:
make -f Makefile.gpu pw-gpu
=================
Error:
.
.
.
.
cd ../../phiGEMM; make phigemm;
make[2]: Entering directory `/root/espresso-5.0.2/phiGEMM'
if test -d src ; then \
	( cd src ; if test "make" = "" ; then make -w ; \
	else make -w ; fi ) ; fi
make[3]: Entering directory `/root/espresso-5.0.2/phiGEMM/src'
mkdir -p ../bin ../lib
ar ruv libphigemm.a phigemm_auxiliary.o phigemm_env.o phigemm_dgemm.o phigemm_zgemm.o phigemm_dgemm_specialK.o phigemm_zgemm_specialK.o phigemm_cgemm.o phigemm_sgemm.o
ar: creating libphigemm.a
a - phigemm_auxiliary.o
a - phigemm_env.o
a - phigemm_dgemm.o
a - phigemm_zgemm.o
a - phigemm_dgemm_specialK.o
a - phigemm_zgemm_specialK.o
a - phigemm_cgemm.o
a - phigemm_sgemm.o
mv libphigemm.a ../lib/.
mkdir -p ../bin ../lib
cc -O3 -fopenmp -fPIC -z muldefs  -o libphigemm.so.2.0 phigemm_auxiliary.o phigemm_env.o phigemm_dgemm.o phigemm_zgemm.o phigemm_dgemm_specialK.o phigemm_zgemm_specialK.o phigemm_cgemm.o phigemm_sgemm.o -L/usr/local/cuda-5.5/lib64 -lcublas  -lcufft -lcudart /root/espresso-5.0.2/GPU/..//phiGEMM/lib/libphigemm.a  /root/espresso-5.0.2/GPU/..//BLAS/blas.a -L/usr/local/cuda-5.5/lib64 -lcublas  -lcufft -lcudart 
/usr/lib/gcc/x86_64-linux-gnu/4.7/../../../x86_64-linux-gnu/crt1.o: In function `_start':
(.text+0x20): undefined reference to `main'
/root/espresso-5.0.2/GPU/..//BLAS/blas.a(xerbla.o): In function `xerbla_':
xerbla.f:(.text+0x44): undefined reference to `_gfortran_st_write'
xerbla.f:(.text+0x54): undefined reference to `_gfortran_transfer_character_write'
xerbla.f:(.text+0x64): undefined reference to `_gfortran_transfer_integer_write'
xerbla.f:(.text+0x6c): undefined reference to `_gfortran_st_write_done'
xerbla.f:(.text+0x75): undefined reference to `_gfortran_stop_string'
collect2: error: ld returned 1 exit status
make[3]: *** [shared] Error 1
make[3]: Leaving directory `/root/espresso-5.0.2/phiGEMM/src'
make[2]: *** [phigemm] Error 2
make[2]: Leaving directory `/root/espresso-5.0.2/phiGEMM'
make[1]: *** [libphiGEMM] Error 2
make[1]: Leaving directory `/root/espresso-5.0.2/GPU/install'
make: *** [libphiGEMM] Error 2
=================================================

 





With the Best Regards

   Reza Behjatmanesh-Ardakani
   Associate Professor of Physical Chemistry
   Address:
   Department of Chemistry,
   School of Science,
   Payame Noor University (PNU),
   Ardakan,
   Yazd,
   Iran.
   E-mails: 
          1- reza_b_m_a at yahoo.com (preferred),
          2- behjatmanesh at pnu.ac.ir, 
          3- reza.b.m.a at gmail.com.
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