[Pw_forum] Noncollinear magnetization and spin orbit coupling problem on Energy convergence and Spin

Paolo Giannozzi paolo.giannozzi at uniud.it
Mon Mar 3 10:47:42 CET 2014


What happens without the O2 molecule? P.

On Sat, 2014-03-01 at 19:30 +0000, Xiao Shi wrote:
> Hi Mulwa and other PW users 
> 
> 
> 
> 
> Thanks for your advise. However, the same problem still happens.
> 
> 
> Has anyone met this kind of situation before? I'm wondering if this is
> the problem of the system or I didn't set the correct parameters.
> 
> 
> 
> 
> On Wed, 26 Feb 2014 2:56pm  Winfred Mulwa <mulwawinfred at gmail.com>
> wrote
> 
> 
> >Try to set  conv_thr = 1.0 d -4 in the namelist electrons
> >On Tue, Feb 25, 2014 at 11:41 PM, Xiao Shi <xiaos at princeton.edu>
> wrote:
> >
> >>  Dear PW users
> >>
> >>  I'm doing calculations on Bi2Se3 system and get some problem with
> the
> >> magnetization of this system.
> >> As Bi2Se3 is a topological insulator, I need large spin orbit
> coupling
> >> effect which means I need to do noncollinear calculation.
> >>
> >>  After adding O2 molecule on the surface, I did spin polarization
> >> calculation where the energy doesn't converge and the system goes
> into
> >> anti-ferromagnetic like shown below:
> >>
> >>
> >>       total energy              =   -5045.36386241 Ry
> >>      Harris-Foulkes estimate   =   -5045.36391863 Ry
> >>      estimated scf accuracy    <       0.00001751 Ry
> >>
> >>       total magnetization       =    -0.00     0.00     2.00 Bohr
> mag/cell
> >>      absolute magnetization    =     3.42 Bohr mag/cell
> >>
> >>
> >>  If I continue for more steps, it will grows into very large
> >> anti-ferromagnetic like 20 Bohr mag/cell for absolute magnetization
> which
> >> is unphysical. The O2 I placed is far away from the surface and
> there
> >> shouldn't be any spin polarization for pristine surface in reality.
> Also
> >> the total energy doesn't change monotonically.
> >>
> >>
> >>  The input file is listed below:
> >> This is a supercell system of Bi2Se3 with 2*2 in the hcp lattice
> and there
> >> are 15 layers of atom for the slab with vacuum larger than 20ans
> (O2 is at
> >> least 10ans away from the slab)
> >>
> >>   &system
> >>    ibrav=4,
> >>    celldm(1)=15.992,
> >>    celldm(3)=6.555356882,
> >>    nat=62,
> >>    ntyp=3,
> >>    ecutwfc=30.0,
> >>    ecutrho=300.0,
> >>    occupations='smearing',
> >>    degauss=0.002,
> >>    noncolin=.true.,
> >>    lspinorb=.true.,
> >>    starting_magnetization(1)=-0.001,
> >>    starting_magnetization(2)=0.001,
> >>    starting_magnetization(3)=0.5,
> >>    london=.true.
> >>    starting_spin_angle=.true.
> >>    nosym=.true.
> >>  /
> >>  &electrons
> >>   mixing_beta=0.2
> >>
> >>   ATOMIC_SPECIES
> >>  Bi 208.98 Bi.rel-pbe-dn-rrkjus.UPF
> >>  Se 78.96 Se.rel-pbe-n-rrkjus_psl.0.2.UPF
> >>  O 16.00 O.rel-pbe-n-rrkjus_psl.0.1.UPF
> >> ATOMIC_POSITIONS {crystal}
> >> O       0.582808125     0.518307602     0.030071968
> >> O       0.438796581     0.511316952     0.033700923
> >> Se      0.333363441     0.666726883     0.270506612
> >> Se      0.333363312     0.166681597     0.270506668
> >> Se      0.833409077     0.166681597     0.270506668
> >> Se      0.833408961     0.666727129     0.270506668
> >> Bi      4E-16   3E-16   0.298539365
> >> Bi      8.34671E-08     0.500045262     0.298539398
> >> Bi      0.500045295     -2.00018E-07    0.298539398
> >> Bi      0.500045179     0.500045262     0.298539398
> >> Se      0.666727117     0.333363441     0.332477455
> >> Se      0.166681746     0.333363493     0.332477478
> >> Se      0.166681629     0.833408578     0.332477478
> >> Se      0.666726948     0.833408578     0.332477478
> >> Bi      0.333363498     0.166681691     0.366247219
> >> Bi      0.833408983     0.166681691     0.366247219
> >> Bi      0.833408867     0.666726943     0.366247219
> >> Bi      0.333363441     0.666726883     0.366247266
> >> Se      3.44477E-08     0.500045237     0.394371017
> >> Se      0.50004532      -1.51013E-07    0.394371017
> >> Se      0.500045204     0.500045237     0.394371017
> >> Se      5E-16   3E-16   0.394371148
> >> Se      0.166681762     0.333363525     0.438001919
> >> Se      0.166681646     0.833408563     0.438001919
> >> Se      0.666726916     0.833408563     0.438001919
> >> Se      0.666727117     0.333363441     0.438001924
> >> Bi      0.333363644     0.166681764     0.466101291
> >> Bi      0.83340891      0.166681764     0.466101291
> >> Bi      0.833408794     0.666726797     0.466101291
> >> Bi      0.333363441     0.666726883     0.466101294
> >> Se      5E-16   4E-16   0.5
> >> Se      -1.1658E-07     0.500045162     0.5
> >> Se      0.500045395     5E-16   0.5
> >> Se      0.500045279     0.500045162     0.5
> >> Bi      0.666727117     0.333363441     0.533898706
> >> Bi      0.166681764     0.333363527     0.533898709
> >> Bi      0.166681648     0.83340856      0.533898709
> >>  Bi      0.666726914     0.83340856      0.533898709
> >> Se      0.333363441     0.666726883     0.561998076
> >> Se      0.333363642     0.166681762     0.561998081
> >> Se      0.833408912     0.166681762     0.561998081
> >> Se      0.833408796     0.666726799     0.561998081
> >> Se      7E-16   5E-16   0.605628852
> >> Se      -2.67539E-07    0.500045087     0.605628983
> >> Se      0.50004547      1.51013E-07     0.605628983
> >> Se      0.500045354     0.500045087     0.605628983
> >> Bi      0.666727117     0.333363441     0.633752734
> >> Bi      0.166681691     0.333363381     0.633752781
> >> Bi      0.166681575     0.833408634     0.633752781
> >> Bi      0.66672706      0.833408634     0.633752781
> >> Se      0.33336361      0.166681746     0.667522522
> >> Se      0.833408928     0.166681746     0.667522522
> >> Se      0.833408812     0.666726831     0.667522522
> >> Se      0.333363441     0.666726883     0.667522545
> >> Bi      -3.16627E-07    0.500045062     0.701460602
> >> Bi      0.500045495     2.00018E-07     0.701460602
> >> Bi      0.500045379     0.500045062     0.701460602
> >> Bi      7E-16   6E-16   0.701460635
> >> Se      0.166681597     0.333363195     0.729493332
> >> Se      0.166681481     0.833408728     0.729493332
> >> Se      0.666727246     0.833408728     0.729493332
> >> Se      0.666727117     0.333363441     0.729493388
> >> K_POINTS {automatic}
> >> 3 3 1 0 0 0
> >>
> >>
> >>  I wonder has any meet this problem before and can give me some
> >> suggestion on it?
> >>
> >>  PS: I've tried increase degauss to 0.05Ryd and decrease
> mixing_beta to
> >> 0.05 which doesn't help
> >>
> >>  Best Regard
> >>
> >>  Xiao Shi
> >> Department of Chemistry
> >> Princeton University
> >>
> >>
> >>
> >>
> >>
> >> _______________________________________________
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> >> Pw_forum at pwscf.org
> >> http://pwscf.org/mailman/listinfo/pw_forum
> >>
> >
> >
> >
> >-- 
> >Mulwa Winfred.
> >D Phil Student, Computational Material Science Group,
> >University of Eldoret,
> >Eldoret, Kenya.
> 
> 
> 
> 
> 
> 
> Best
> Xiao Shi
> Department of Chemistry
> Princeton University
> 
> 
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-- 
 Paolo Giannozzi, Dept. Chemistry&Physics&Environment, 
 Univ. Udine, via delle Scienze 208, 33100 Udine, Italy
 Phone +39-0432-558216, fax +39-0432-558222 




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