[Pw_forum] phcg restart problem
weeliat
owl1sg at yahoo.com
Sat Jan 4 18:56:22 CET 2014
Dear All,
Thanks for the reply. I have since compiled v5.0.2 but got the same error upon restart.
The initial output from the phcg run is shown below. I stopped it prematurely to test the restart capability:
Program PHCG v.5.0.2 (svn rev. 9392) starts on 3Jan2014 at 13:20:23
This program is part of the open-source Quantum ESPRESSO suite
for quantum simulation of materials; please cite
"P. Giannozzi et al., J. Phys.:Condens. Matter 21 395502 (2009);
URL http://www.quantum-espresso.org",
in publications or presentations arising from this work. More details at
http://www.quantum-espresso.org/quote.php
Parallel version (MPI), running on 32 processors
R & G space division: proc/nbgrp/npool/nimage = 32
Info: using nr1, nr2, nr3 values from input
Info: using nr1s, nr2s, nr3s values from input
IMPORTANT: XC functional enforced from input :
Exchange-correlation = SLA PZ NOGX NOGC ( 1 1 0 0 0)
EXX-fraction = 0.00
Any further DFT definition will be discarded
Please, verify this is what you really want
file H.pz-vbc.UPF: wavefunction(s) 1S renormalized
Parallelization info
--------------------
sticks: dense smooth PW G-vecs: dense smooth PW
Min 1118 1118 280 159290 159290 19920
Max 1120 1120 282 159300 159300 19926
Sum 35781 35781 8969 5097465 5097465 637483
Tot 17891 17891 4485
*** Starting Conjugate Gradient minimization ***
*** pol. # 1 : 138 iterations
*** pol. # 2 : 138 iterations
*** pol. # 3 : 136 iterations
ATOMIC_POSITIONS
Se 0.000244440 0.000055869 0.221532863
Co -0.000378387 0.106617176 0.320298820
Se 0.142919561 0.083743738 0.333072366
P 0.010001498 0.214824211 0.249814145
.(edited)
.
.
.
*** Starting Conjugate Gradient minimization ***
d2ion: alpha = 0.50
*** mode # 1 : using asr
*** mode # 2 : using asr
*** mode # 3 : using asr
*** mode # 4 : 126 iterations
*** mode # 5 : 124 iterations
*** mode # 6 : 126 iterations
*** mode # 7 : 118 iterations
Everything in the initial run seems fine. The restart phcg.x ouput shows this:
Program PHCG v.5.0.2 (svn rev. 9392) starts on 4Jan2014 at 12:29:52
This program is part of the open-source Quantum ESPRESSO suite
for quantum simulation of materials; please cite
"P. Giannozzi et al., J. Phys.:Condens. Matter 21 395502 (2009);
URL http://www.quantum-espresso.org",
in publications or presentations arising from this work. More details at
http://www.quantum-espresso.org/quote.php
Parallel version (MPI), running on 32 processors
R & G space division: proc/nbgrp/npool/nimage = 32
Info: using nr1, nr2, nr3 values from input
Info: using nr1s, nr2s, nr3s values from input
IMPORTANT: XC functional enforced from input :
Exchange-correlation = SLA PZ NOGX NOGC ( 1 1 0 0 0)
EXX-fraction = 0.00
Any further DFT definition will be discarded
Please, verify this is what you really want
file H.pz-vbc.UPF: wavefunction(s) 1S renormalized
Parallelization info
--------------------
sticks: dense smooth PW G-vecs: dense smooth PW
Min 1118 1118 280 159290 159290 19920
Max 1120 1120 282 159300 159300 19926
Sum 35781 35781 8969 5097465 5097465 637483
Tot 17891 17891 4485
The output stops here with a error msg from the pbs:
An error occurred in MPI_Allreduce
on communicator MPI COMMUNICATOR 9 SPLIT FROM 7
MPI_ERR_TRUNCATE: message truncated
MPI_ERRORS_ARE_FATAL (your MPI job will now abort)
I am not sure if this error is due to my compilers or mpi software (seems less probable as the initial run is ok) or is there something with the restart function in phcg?
Thanks,
wee liat
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