[Pw_forum] Getting error

Manu Hegde mhegde at uwaterloo.ca
Sun Dec 15 23:04:22 CET 2013


Thaks for your help. Now I am getting error while using the band.x, I have
seen the previous thread, I tried it but still it is showing the same
error!. Could anyone please help me to solve this problem!

     Program BANDS v.5.0.2 (svn rev. 9392) starts on 15Dec2013 at 16:35:28

     This program is part of the open-source Quantum ESPRESSO suite
     for quantum simulation of materials; please cite
         "P. Giannozzi et al., J. Phys.:Condens. Matter 21 395502 (2009);
          URL http://www.quantum-espresso.org",
     in publications or presentations arising from this work. More details
at
     http://www.quantum-espresso.org/quote.php

     Serial version

 %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
     Error in routine bands (1):
     gamma_only case not implemented
 %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%

     stopping ...



On Sun, Dec 15, 2013 at 1:32 AM, stefano de gironcoli <degironc at sissa.it>wrote:

>  dear  (please your name here....)
>
>    namelist &inputpp no longer valid: please use &projwfc instead
>
> stefano
>
>
>
> On 12/15/2013 05:02 AM, Manu Hegde wrote:
>
>  ​Sorry for troubling again. I found the solution for my previous
> problem> It was bad pseudo potential!.​ Now I am trying to run Projwfc.in.
> But I am getting following error!
>
>   Program PROJWFC v.5.0.2 (svn rev. 9392) starts on 14Dec2013 at 22:54:14
>
>       This program is part of the open-source Quantum ESPRESSO suite
>      for quantum simulation of materials; please cite
>          "P. Giannozzi et al., J. Phys.:Condens. Matter 21 395502 (2009);
>           URL http://www.quantum-espresso.org",
>      in publications or presentations arising from this work. More details
> at
>      http://www.quantum-espresso.org/quote.php
>
>       Serial version
> *** namelist &inputpp no longer valid: please use &projwfc instead
>
>
>  %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
>      Error in routine do_projwfc (5010):
>      reading projwfc namelist
>
>  %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
>
>       stopping ...
>
>
>
> On Sat, Dec 14, 2013 at 9:14 PM, Manu Hegde <mhegde at uwaterloo.ca> wrote:
>
>>  Thanks for pointing my serious mistake!. Now I am getting this message,
>> I am completely new to QE. Please let me know If i am doing some serious
>> mistake!.
>>
>>
>>       Program PWSCF v.5.0.2 (svn rev. 9392) starts on 14Dec2013 at 21:
>> 7:31
>>
>>       This program is part of the open-source Quantum ESPRESSO suite
>>      for quantum simulation of materials; please cite
>>          "P. Giannozzi et al., J. Phys.:Condens. Matter 21 395502 (2009);
>>           URL http://www.quantum-espresso.org",
>>      in publications or presentations arising from this work. More
>> details at
>>      http://www.quantum-espresso.org/quote.php
>>
>>       Serial version
>>
>>       Current dimensions of program PWSCF are:
>>      Max number of different atomic species (ntypx) = 10
>>      Max number of k-points (npk) =  40000
>>      Max angular momentum in pseudopotentials (lmaxx) =  3
>>      Waiting for input...
>>      Reading input from standard input
>>                file Ga.pbe-mt_fhi.UPF: wavefunction(s)  4d 4f renormalized
>>                file O.pz-rrkjus.UPF: wavefunction(s)  2S renormalized
>>
>>       gamma-point specific algorithms are used
>>
>>       G-vector sticks info
>>      --------------------
>>      sticks:   dense  smooth     PW     G-vecs:    dense   smooth      PW
>>      Sum        2083    2083    519                 9795     9795    1227
>>      Tot        1042    1042    260
>>
>>
>>
>>       bravais-lattice index     =          -12
>>      lattice parameter (alat)  =      23.1114  a.u.
>>      unit-cell volume          =     205.5299 (a.u.)^3
>>      number of atoms/cell      =           30
>>      number of atomic types    =            2
>>      number of electrons       =       144.00
>>      number of Kohn-Sham states=          200
>>      kinetic-energy cutoff     =      50.0000  Ry
>>      charge density cutoff     =     200.0000  Ry
>>      convergence threshold     =      1.0E-06
>>      mixing beta               =       0.7000
>>      number of iterations used =            8  plain     mixing
>>      Exchange-correlation      =  SLA  PZ   NOGX NOGC ( 1 4 3 4 0)
>>      EXX-fraction              =        0.00
>>
>>       celldm(1)=  23.111351  celldm(2)=   0.248569  celldm(3)=   0.474816
>>      celldm(4)=   0.000000  celldm(5)=  -0.990000  celldm(6)=   0.000000
>>
>>       crystal axes: (cart. coord. in units of alat)
>>                 a(1) = (   1.000000   0.000000   0.000000 )
>>                a(2) = (   0.000000   0.248569   0.000000 )
>>                a(3) = (  -0.470068   0.000000   0.066981 )
>>
>>       reciprocal axes: (cart. coord. in units 2 pi/alat)
>>                b(1) = (  1.000000 -0.000000  7.017924 )
>>                b(2) = (  0.000000  4.023026 -0.000000 )
>>                b(3) = (  0.000000  0.000000 14.929597 )
>>
>>
>>       PseudoPot. # 1 for Ga read from file:
>>      /host/qexpress/espresso-5.0.2/pseudo/Ga.pbe-mt_fhi.UPF
>>      MD5 check sum: d2addd91d8bcf9a88adfbbdfd2637de8
>>      Pseudo is Norm-conserving, Zval =  3.0
>>      Generated using FHI98PP, converted with fhi2upf.x v.5.0.2
>>      Using radial grid of  529 points,  3 beta functions with:
>>                 l(1) =   1
>>                 l(2) =   2
>>                 l(3) =   3
>>
>>       PseudoPot. # 2 for O  read from file:
>>      /host/qexpress/espresso-5.0.2/pseudo/O.pz-rrkjus.UPF
>>      MD5 check sum: 24fb942a68ef5d262e498166c462ef4a
>>      Pseudo is Ultrasoft, Zval =  6.0
>>      Generated by new atomic code, or converted to UPF format
>>      Using radial grid of 1269 points,  4 beta functions with:
>>                 l(1) =   0
>>                 l(2) =   0
>>                  l(3) =   1
>>                 l(4) =   1
>>      Q(r) pseudized with 0 coefficients
>>
>>
>>       atomic species   valence    mass     pseudopotential
>>         Ga             3.00    31.00000     Ga( 1.00)
>>          O              6.00     8.00000     O ( 1.00)
>>
>>       No symmetry found
>>
>>
>>
>>     Cartesian axes
>>
>>       site n.     atom                  positions (alat units)
>>          1           Ga  tau(   1) = (   0.0003320   0.0000000
>> 0.3657895  )
>>          2           Ga  tau(   2) = (   0.0003320   0.2483320
>> 0.3657895  )
>>          3           Ga  tau(   3) = (   0.8850328   0.0000000
>> 0.0945547  )
>>          4           Ga  tau(   4) = (   0.8850328   0.2483320
>> 0.0945547  )
>>          5           Ga  tau(   5) = (   0.4996778   0.1241660
>> 0.3657895  )
>>          6           Ga  tau(   6) = (   0.3856869   0.1241660
>> 0.0945547  )
>>          7           Ga  tau(   7) = (   0.1228078   0.1241660
>> 0.1445481  )
>>          8           Ga  tau(   8) = (   0.7625569   0.1241660
>> 0.3157961  )
>>          9           Ga  tau(   9) = (   0.6221536   0.0000000
>> 0.1445481  )
>>         10           Ga  tau(  10) = (   0.6221536   0.2483320
>> 0.1445481  )
>>         11           Ga  tau(  11) = (   0.2632110   0.0000000
>> 0.3157961  )
>>         12           Ga  tau(  12) = (   0.2632110   0.2483320
>> 0.3157961  )
>>         13           O   tau(  13) = (   0.1518415   0.0000000
>> 0.0505458  )
>>         14           O   tau(  14) = (   0.1518415   0.2483320
>> 0.0505458  )
>>         15           O   tau(  15) = (   0.7335232   0.0000000
>> 0.4097984  )
>>         16           O   tau(  16) = (   0.7335232   0.2483320
>> 0.4097984  )
>>         17           O   tau(  17) = (   0.6511873   0.1241660
>> 0.0505458  )
>>         18           O   tau(  18) = (   0.2341774   0.1241660
>> 0.4097984  )
>>         19           O   tau(  19) = (   0.1092475   0.0000000
>> 0.2592658  )
>>         20           O   tau(  20) = (   0.1092475   0.2483320
>> 0.2592658  )
>>         21           O   tau(  21) = (   0.7761172   0.0000000
>> 0.2010783  )
>>         22           O   tau(  22) = (   0.7761172   0.2483320
>> 0.2010783  )
>>         23           O   tau(  23) = (   0.6085934   0.1241660
>> 0.2592658  )
>>         24           O   tau(  24) = (   0.2767714   0.1241660
>> 0.2010783  )
>>         25           O   tau(  25) = (   0.9656173   0.1241660
>> 0.1181243  )
>>         26           O   tau(  26) = (  -0.0802525   0.1241660
>> 0.3422199  )
>>         27           O   tau(  27) = (   0.4662714   0.0000000
>> 0.1181243  )
>>         28           O   tau(  28) = (   0.4662714   0.2483320
>> 0.1181243  )
>>         29           O   tau(  29) = (   0.4190934   0.0000000
>> 0.3422199  )
>>         30           O   tau(  30) = (   0.4190934   0.2483320
>> 0.3422199  )
>>
>>       number of k points=     1
>>                         cart. coord. in units 2pi/alat
>>         k(    1) = (   0.0000000   0.0000000   0.0000000), wk =
>> 2.0000000
>>
>>       Dense  grid:     4898 G-vectors     FFT dimensions: ( 108,  25,
>>  50)
>>
>>       Largest allocated arrays     est. size (Mb)     dimensions
>>         Kohn-Sham Wavefunctions         1.87 Mb     (    614,  200)
>>         NL pseudopotentials             3.04 Mb     (    614,  324)
>>         Each V/rho on FFT grid          2.06 Mb     ( 135000)
>>         Each G-vector array             0.04 Mb     (   4898)
>>         G-vector shells                 0.02 Mb     (   2598)
>>      Largest temporary arrays     est. size (Mb)     dimensions
>>         Auxiliary wavefunctions         3.75 Mb     (    614,  800)
>>         Each subspace H/S matrix        4.88 Mb     ( 800, 800)
>>         Each <psi_i|beta_j> matrix      0.49 Mb     (    324,  200)
>>         Arrays for rho mixing          16.48 Mb     ( 135000,   8)
>>
>>       Initial potential from superposition of free atoms
>>
>>       starting charge  143.97340, renormalised to  144.00000
>>      Starting wfc are  264 randomized atomic wfcs
>>
>>
>>  %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
>>      Error in routine rdiaghg (465):
>>      S matrix not positive definite
>>
>>  %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
>>
>>       stopping ...
>>
>>
>>
>> On Sat, Dec 14, 2013 at 11:46 AM, Giovanni Pizzi <giovanni.pizzi at epfl.ch>wrote:
>>
>>>  Dear Manu Hedge,
>>> from a first inspection to your input file:
>>> - as the name of the variable and the documentation say, cosAB, cosAC
>>> and cosBC are the cosines of the angles and not the angle in degrees, and
>>> as such must be a number between -1 and 1
>>> - do you really need to specify nr1, nr2, nr3, nr1s, nr2s, nr3s?
>>>
>>>  Best,
>>> Giovanni
>>>
>>>  --
>>> Giovanni Pizzi
>>> Post-doctoral Research Scientist
>>> EPFL STI IMX THEOS
>>> MXC 340 (Bâtiment MXC)
>>> Station 12
>>> CH-1015 Lausanne (Switzerland)
>>> Phone: +41 21 69 31124 <%2B41%2021%2069%2031124>
>>>
>>>
>>>
>>>
>>>  On 14 Dec 2013, at 17:13, Manu Hegde wrote:
>>>
>>>  Sorry about giving less informaton. Here is my input file for
>>> monoclinic gallium oxide supercell. Gallium is in both Td and Oh
>>> coordinates and Oxygen is in three asymmetric position.
>>>
>>>   &CONTROL
>>>                  calculation = 'scf' ,
>>>                       outdir = '/home/owner/' ,
>>>                   pseudo_dir = '/host/qexpress/espresso-5.0.2/pseudo/' ,
>>>                       prefix = 'galium' ,
>>>  /
>>>  &SYSTEM
>>>                        ibrav = -12,
>>>                            A = 12.23 ,
>>>                            B = 3.040 ,
>>>                            C = 5.807 ,
>>>                        cosAB = 90 ,
>>>                        cosAC = 103.7 ,
>>>                        cosBC = 90 ,
>>>                          nat = 30,
>>>                         ntyp = 2,
>>>                      ecutwfc = 50 ,
>>>                      ecutrho = 200 ,
>>>                        nosym = .true. ,
>>>                    nosym_evc = .true. ,
>>>                        noinv = .true. ,
>>>                     no_t_rev = .true. ,
>>>             force_symmorphic = .true. ,
>>>                 use_all_frac = .true. ,
>>>                         nbnd = 200,
>>>                   tot_charge = 0.000000,
>>>             exxdiv_treatment = 'gygi-baldereschi' ,
>>>                          nr1 = 21 ,
>>>                          nr2 = 17 ,
>>>                          nr3 = 26 ,
>>>                         nr1s = 13 ,
>>>                         nr2s = 14 ,
>>>                         nr3s = 11 ,
>>>  /
>>>  &ELECTRONS
>>>  /
>>> ATOMIC_SPECIES
>>>    Ga   31.00000  Ga.pbe-mt_fhi.UPF
>>>     O    8.00000  O.pz-rrkjus.UPF
>>> ATOMIC_POSITIONS angstrom
>>>    Ga      0.004060000    0.000000000    4.473605000    1  0  1
>>>    Ga      0.004060000    3.037100000    4.473605000    1  1  1
>>>    Ga     10.823951000    0.000000000    1.156404000    1  1  1
>>>    Ga     10.823951000    3.037100000    1.156404000    1  1  1
>>>    Ga      6.111060000    1.518550000    4<518550000%20%C2%A0%20%C2%A04>.473605000
>>>    1  1  1
>>>    Ga      4.716951000    1 <716951000%20%C2%A0%20%C2%A01>.518550000
>>>  1 <518550000%20%C2%A0%20%C2%A01>.156404000    1  1  1
>>>    Ga      1.501940000    1 <501940000%20%C2%A0%20%C2%A01>.518550000
>>>  1 <518550000%20%C2%A0%20%C2%A01>.767823000    1  1  1
>>>    Ga      9.326071000    1.518550000    3<518550000%20%C2%A0%20%C2%A03>.862186000
>>>    1  1  1
>>>    Ga      7.608939000    0 <608939000%20%C2%A0%20%C2%A00>.000000000
>>>  1.767823000    1  0  1
>>>    Ga      7.608939000    3 <608939000%20%C2%A0%20%C2%A03>.037100000
>>>  1.767823000    1  1  1
>>>    Ga      3.219071000    0.000000000    3.862186000    1  0  1
>>>    Ga      3.219071000    3.037100000    3.862186000    1  1  1
>>>     O      1.857021000    0.000000000    0.618175000    1  0  1
>>>     O      1.857021000    3.037100000    0.618175000    1  1  1
>>>     O      8.970989000    0 <970989000%20%C2%A0%20%C2%A00>.000000000
>>>  5.011834000    1  0  1
>>>     O      8.970989000    3 <970989000%20%C2%A0%20%C2%A03>.037100000
>>>  5.011834000    1  1  1
>>>     O      7.964021000    1.518550000    0<518550000%20%C2%A0%20%C2%A00>.618175000
>>>    1  1  1
>>>     O      2.863989000    1 <863989000%20%C2%A0%20%C2%A01>.518550000
>>>  5 <518550000%20%C2%A0%20%C2%A05>.011834000    1  1  1
>>>     O      1.336097000    0.000000000    3.170821000    1  0  1
>>>     O      1.336097000    3.037100000    3.170821000    1  1  1
>>>     O      9.491913000    0.000000000    2.459188000    1  0  1
>>>     O      9.491913000    3.037100000    2.459188000    1  1  1
>>>     O      7.443097000    1.518550000    3.170821000    1  1  1
>>>     O      3.384914000    1.518550000    2.459188000    1  1  1
>>>     O     11.809499000    1.518550000    1.444660000    1  1  1
>>>     O     -0.981488000    1.518550000    4.185349000    1  1  1
>>>     O      5.702499000    0.000000000    1.444660000    1  0  1
>>>     O      5.702499000    3.037100000    1.444660000    1  1  1
>>>     O      5.125512000    0.000000000    4.185349000    1  0  1
>>>     O      5.125512000    3.037100000    4.185349000    1  1  1
>>> K_POINTS automatic
>>>   2 2 2   1 1 1
>>>
>>>
>>>  Here is my output error
>>>
>>>      Program PWSCF v.5.0.2 (svn rev. 9392) starts on 12Dec2013 at
>>> 21:26:31
>>>
>>>      This program is part of the open-source Quantum ESPRESSO suite
>>>      for quantum simulation of materials; please cite
>>>          "P. Giannozzi et al., J. Phys.:Condens. Matter 21 395502 (2009);
>>>           URL http://www.quantum-espresso.org",
>>>      in publications or presentations arising from this work. More
>>> details at
>>>      http://www.quantum-espresso.org/quote.php
>>>
>>>      Serial version
>>>
>>>      Current dimensions of program PWSCF are:
>>>      Max number of different atomic species (ntypx) = 10
>>>      Max number of k-points (npk) =  40000
>>>      Max angular momentum in pseudopotentials (lmaxx) =  3
>>>      Waiting for input...
>>>      Reading input from standard input
>>>                file Ga.pbe-mt_fhi.UPF: wavefunction(s)  4d 4f
>>> renormalized
>>>                file O.pz-rrkjus.UPF: wavefunction(s)  2S renormalized
>>>
>>>      Atomic positions and unit cell read from directory:
>>>      /home/owner/galium.save/
>>>      Nothing found: using input atomic positions and unit cell
>>>
>>>
>>>    Info: using nr1, nr2, nr3 values from input
>>>
>>>    Info: using nr1s, nr2s, nr3s values from input
>>>
>>>
>>>  %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
>>>      Error in routine set_sym_bl (1):
>>>      some problem with symmetries
>>>
>>>  %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
>>>
>>>      stopping ...
>>>
>>>
>>>
>>> On Sat, Dec 14, 2013 at 3:54 AM, Paolo Giannozzi <
>>> paolo.giannozzi at uniud.it> wrote:
>>>
>>>>  On Fri, 2013-12-13 at 12:10 -0500, Manu Hegde wrote:
>>>> > Hello,
>>>> >
>>>> > I am just trying to run pw.x on PWgui, I am successfully inserted all
>>>> > the parameters, but when I run the program it is saying ' Error in
>>>> > routine set sym_bl (1): some problem with symmetries'. Can any one
>>>> > please help me in fixing it.
>>>>
>>>>  see here:
>>>> http://qe-forge.org/pipermail/pw_forum/2013-February/101018.html
>>>> and if this is not your case, go into the fortran code and figure
>>>> out why the code finds more than 24 symmetry operations. Since you
>>>> did not provide any of the needed info (an input file, code version,
>>>> tests etc: you didn't read the posting guidelines, did you?) you
>>>> do not deserve more help than this
>>>>
>>>> P.
>>>>
>>>> --
>>>> Paolo Giannozzi, Dept. Chemistry&Physics&Environment,
>>>> Univ. Udine, via delle Scienze 208, 33100 Udine, Italy
>>>> Phone +39-0432-558216, fax +39-0432-558222
>>>>
>>>> _______________________________________________
>>>> Pw_forum mailing list
>>>> Pw_forum at pwscf.org
>>>> http://pwscf.org/mailman/listinfo/pw_forum
>>>>
>>>
>>>  _______________________________________________
>>> Pw_forum mailing list
>>> Pw_forum at pwscf.org
>>> http://pwscf.org/mailman/listinfo/pw_forum
>>>
>>>
>>>
>>> _______________________________________________
>>> Pw_forum mailing list
>>> Pw_forum at pwscf.org
>>> http://pwscf.org/mailman/listinfo/pw_forum
>>>
>>
>>
>
>
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