[Pw_forum] PW is frozen
Filippo Spiga
spiga.filippo at gmail.com
Mon Apr 15 22:27:10 CEST 2013
Dear Virginie,
to spot where the problem is you might want to start from the bottom instead of starting from the top. I think almost all the examples provided in the QE distribution can run in serial on a decent workstation. If I were you I will try these options first
1) GNU compilers in serial, without external libraries (editing make.sys and replacing -O2 or -O3 with -O0)
$env FC=gfortran F90=gfortran CC=gcc ./configure --disable-parallel --disable-openmp --with-internal-blas --with-internal-lapack
2) Intel compilers in serial, without external libraries (editing make.sys and replacing -O2 or -O3 with -O0)
env FC=ifort F90= ifort CC=icc ./configure --disable-parallel --disable-openmp --with-internal-blas --with-internal-lapack
3) Intel compilers in serial, with MKL (editing make.sys and replacing -O2 or -O3 with -O0)
env FC=ifort F90= ifort CC=icc ./configure --disable-parallel --disable-openmp
and then try switching in parallel….
F
On Apr 15, 2013, at 3:50 PM, TRINITE Virginie <virginie.trinite at thalesgroup.com> wrote:
> Dear all
>
> I have investigated a lot of configurations concerning this problem: changing the library fftw3 blas and lapack, changing the version of espresso , compiling on a node and not on the master, changing the optimization level from -O3 to -O2 (I have no -x flags by default)....
> The problem change or disappear for a particular input file, but I have not found a stable situation where I can run all the tests of PW without error with an increasing number of processors (say until 8 processors).
> The more common error is pw frozen, with no output (difficult to debug).
> With the tests of PW, the berry calculation is usually the first one to fail with message like that:
> Frome addusden_r :error # 1
> Expected 44.000000, found 44.44233857: wrong charge, increase ecutrho
>
> Finally I think that either my machine has a very nasty problem or
> the problem can come from the compiler (I use ifort 12.1.3).
> It is not the first time that I have problem with the compiler, so I wonder which version of ifort can I use without problem?
> Usually I also use the mkl, but I recompile fftw3 and openmpi with ifort. Is it the more stable way to do?
>
> Thanks in advance for your response
>
> Virginie Trinité
>
>
> -----Message d'origine-----
> De : pw_forum-bounces at pwscf.org [mailto:pw_forum-bounces at pwscf.org] De la part de Paolo Giannozzi
> Envoyé : mardi 2 avril 2013 21:44
> À : PWSCF Forum
> Objet : Re: [Pw_forum] PW is frozen
>
> On Fri, 2013-03-29 at 10:38 +0100, TRINITE Virginie wrote:
>
>> I find a very strange behavior of pw.x: It run endlessly without
>> output anything and with no error, and I have finally to kill it
>>
>> This behavior appears by using 6 processors for Iron calculation
>
> your input works for me on 6 processors (more exactly, 6 processes on 2 processors), with slightly different pseudopotentials. V.5.0 may run into strange problems on some machines with k-point parallelization (details in the Doc/release-notes file).
> If this is not your case, it is hard to say what the problem can be without the possibility to make a few tests and to see what is really happening and under which exact conditions. Apart from trying a more recent version, you might consider a poor-man (or poor-woman) debugging by inserting print statements in the main program until you figure out where it hangs
>
> Paolo
> --
> Paolo Giannozzi, Dept. Chemistry&Physics&Environment, Univ. Udine, via delle Scienze 208, 33100 Udine, Italy Phone +39-0432-558216, fax +39-0432-558222
>
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--
Mr. Filippo SPIGA, M.Sc.
http://filippospiga.me ~ skype: filippo.spiga
«Nobody will drive us out of Cantor's paradise.» ~ David Hilbert
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