[Pw_forum] Calculation of Gibbs free energies
Torstein Fjermestad
torstein.fjermestad at kjemi.uio.no
Tue Jul 10 16:44:56 CEST 2012
Dear all,
In one of my projects I would need to compute the Gibbs free energies
of structures along a reaction path. After looking through the QE
webpage, the pw_forum, and the documentation in the quantum espresso
installation directory I think I understand the general procedure:
1. one calculates the phonons
2. one computes the interatomic Force Constants with the q2r.x program
3. one uses the matdyn.x to produce input for the F_QHA.x program
4. with the F_QHA.x program one can compute the Gibbs free energy and
other thermodynamical properties.
(please correct me if I have misunderstood this general procedure)
The problem is that I have so far only managed to complete step 1, to
compute the phonons. I am currently doing test calculations on a water
molecule and this is the input file of the phonon calculation:
phonons of H2O in super cell at Gamma
&inputph
outdir='./',
prefix='h2o',
amass(1)=1.01,
amass(2)=16.01,
fildyn='h2o.dynG',
trans= .true.
/
0.0 0.0 0.0
I then try to run the q2r.x calculation with the following input:
test of q2r calculation
&input
fildyn='h2o.dynG',
flfrc='h2o-output-q2r.fc',
zasr='no'
This calculation crashes presumably because it expects a file called
h2o.dynG0. But from where do I get this file? As far as I can see the
phonon calculation only produces the file h2o.dynG, not a h2o.dynG0
file.
I am completely lost at the moment so I would appreciate if anyone
could help me with carrying out the q2r calculation correctly.
Thank you very much in advance,
Yours sincerely,
Torstein Fjermestad,
University of Oslo,
Norway
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