[Pw_forum] neb.x with intermediate images
Arles V. Gil Rebaza
arvifis at gmail.com
Tue May 3 00:33:12 CEST 2011
If you look in your input file, the intermediate atomic position are wrong.
Is impossible put 3 atoms in the same xyz position.
INTERMEDIATE_IMAGE 1
ATOMIC_POSITIONS {bohr}
H 0.0000000000 0.0000000000 0.0000000000
H 0.0000000000 0.0000000000 0.0000000000
H 0.0000000000 0.0000000000 0.0000000000
Best.
PhD std. Arles V. Gil Rebaza
Instituto de Física La Plata
La Plata - Argentina
2011/5/2 Patricia Alejandra Paredes-Olivera <patricia.a.paredes at gmail.com>
> When I run neb.x with intermediate images I get a message of error:
>
> forrtl: severe (24): end-of-file during read, unit 99, file
> /home/patricia/neb/prueba.in
> Image PC Routine Line Source
> neb.x 000000000097F7DD Unknown Unknown Unknown
> neb.x 000000000097E2E5 Unknown Unknown Unknown
> neb.x 0000000000914D29 Unknown Unknown Unknown
> neb.x 00000000008AA1CA Unknown Unknown Unknown
> neb.x 00000000008A99C0 Unknown Unknown Unknown
> neb.x 00000000008D5970 Unknown Unknown Unknown
> neb.x 0000000000455233 path_gen_inputs_ 164
> path_gen_inputs.f90
> neb.x 0000000000436DD4 MAIN__ 89 neb.f90
> neb.x 0000000000436C22 Unknown Unknown Unknown
> libc.so.6 0000003F51A1D974 Unknown Unknown Unknown
> neb.x 0000000000436B49 Unknown Unknown Unknown
>
> The input file is the one provided with the example17 with 1 intermediate
> image:
>
> BEGIN
> BEGIN_PATH_INPUT
> &PATH
> restart_mode = 'from_scratch'
> string_method = 'neb',
> nstep_path = 20,
> ds = 2.D0,
> opt_scheme = "broyden",
> num_of_images = 3,
> k_max = 0.3D0,
> k_min = 0.2D0,
> CI_scheme = "auto",
> path_thr = 0.1D0,
> /
> END_PATH_INPUT
> BEGIN_ENGINE_INPUT
> &CONTROL
> prefix = "prueba"
> outdir = "/tmp",
> pseudo_dir = "/home/patricia/Programas/pwscf/pseudo",
> /
> &SYSTEM
> ibrav = 0,
> celldm(1) = 1.D0,
> nat = 3,
> ntyp = 1,
> ecutwfc = 20.0D0,
> ecutrho = 100.0D0,
> occupations = "smearing",
> degauss = 0.03D0,
> /
> &ELECTRONS
> conv_thr = 1.D-8,
> mixing_beta = 0.3D0,
> /
> &IONS
> pot_extrapolation = "second_order",
> wfc_extrapolation = "second_order",
> /
> ATOMIC_SPECIES
> H 1.00794 C.pbe-rrkjus.UPF
> BEGIN_POSITIONS
> FIRST_IMAGE
> ATOMIC_POSITIONS {bohr}
> H -2.4165936061 0.0000000000 0.0000000000
> H 0.0000000000 0.0000000000 0.0000000000
> H 0.8243346657 0.0000000000 0.0000000000
> INTERMEDIATE_IMAGE 1
> ATOMIC_POSITIONS {bohr}
> H 0.0000000000 0.0000000000 0.0000000000
> H 0.0000000000 0.0000000000 0.0000000000
> H 0.0000000000 0.0000000000 0.0000000000
> LAST_IMAGE
> ATOMIC_POSITIONS {bohr}
> H -0.8243346657 0.0000000000 0.0000000000
> H 0.0000000000 0.0000000000 0.0000000000
> H 2.4165936061 0.0000000000 0.0000000000
> END_POSITIONS
> K_POINTS { gamma }
> CELL_PARAMETERS { cubic }
> 12.00000 0.00000 0.00000
> 0.00000 5.00000 0.00000
> 0.00000 0.00000 5.00000
> END_ENGINE_INPUT
> END
>
> Thanks!
>
> Patricia Paredes-Olivera
> INFIQC
> Universidad Nacional de Córdoba - Argentina.
>
>
>
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>
>
--
###---------> Arles V. <---------###
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