[Pw_forum] Zn NCPP pseudopotential
giacsport at libero.it
giacsport at libero.it
Wed Jun 16 05:55:37 CEST 2010
Dear All,
excuse me if the question maybe can appear as "weird" but I am
quite new with PWSCF.
I would like to do some calculations on ZnO systems by using NCPP (in
principle PBE at this level could be OK)
Anyway, I checked the database of pseudopotentials and I noticed that an NCPP
for Zn is missing.
Reading the suggestions in the Doc I went to the Rappe Group PSP Page for
GGA
generated Potentials and I found Zn psp in abinit (fhi) format.
( http://www.sas.upenn.edu/rappegroup/htdocs/Research/PSP/zn.optgga1.fhi )
I used the "fhi2upf" tools following the instructions required and thus I
generated both a NCPP for both Zn and O.
(In details Zn 4S,2 4P,0 3d,10 3f,0 and O 2S,2 2P,4)
then I tested it on a "vc-relax' calculation on the WZ-like structure of ZnO
this is my input file
>&control
> calculation='vc-relax',
> pseudo_dir='/home/giacomo/src/pseudo/'
> prefix='ZnO'
> wf_collect=.true.
> outdir='/scr/giacomo/PWSCF_test/ZnO/test_pseudo/'
> tprnfor=.true.
> etot_conv_thr=1.0D-8
> forc_conv_thr=1.0D-4
>/
>&system
> ntyp=2, nat=4, ibrav=4, a=3.2417, c= 5.18760,
> ecutwfc= 30., force_symmorphic=.true.
>/
>&ELECTRONS
> diagonalization='david'
> mixing_mode = 'plain'
> mixing_beta = 0.7
> conv_thr = 1.0d-8
>/
>&IONS
> ion_dynamics = 'bfgs',
>/
>&cell
> cell_dynamics='bfgs'
>/
>ATOMIC_SPECIES
>Zn 65.39 30-Zn.PBE.fhi.UPF
>O 15.9994 08-O.PBE.fhi.UPF
>ATOMIC_POSITIONS crystal
> Zn 0.33330 0.66670 0.00000
> Zn 0.66660 0.33330 0.50000
> O 0.33330 0.66670 0.38190
> O 0.66660 0.33330 0.88190
>K_POINTS (automatic)
> 4 4 4 1 1 1
and this is what I got in the output:
.....
> bravais-lattice index = 4
> lattice parameter (a_0) = 6.1259 a.u.
> unit-cell volume = 318.5953 (a.u.)^3
> number of atoms/cell = 4
> number of atomic types = 2
> number of electrons = 36.00
> number of Kohn-Sham states= 18
> kinetic-energy cutoff = 30.0000 Ry
> charge density cutoff = 120.0000 Ry
> convergence threshold = 1.0E-08
> mixing beta = 0.7000
> number of iterations used = 8 plain mixing
> Exchange-correlation = SLA PZ NOGX NOGC (1100)
> nstep = 50
>
>
> celldm(1)= 6.125925 celldm(2)= 0.000000 celldm(3)= 1.600271
> celldm(4)= 0.000000 celldm(5)= 0.000000 celldm(6)= 0.000000
>
> crystal axes: (cart. coord. in units of a_0)
> a(1) = ( 1.000000 0.000000 0.000000 )
> a(2) = ( -0.500000 0.866025 0.000000 )
> a(3) = ( 0.000000 0.000000 1.600271 )
>....
> Initial potential from superposition of free atoms
> Check: negative starting charge= -0.000653
>
> starting charge 35.99993, renormalised to 36.00000
>.....
and at the end
>.....
> bfgs converged in 13 scf cycles and 11 bfgs steps
> (criteria: energy < 0.10E-07, force < 0.10E-03, cell < 0.50E+00)
>
> End of BFGS Geometry Optimization
>
> Final enthalpy = -269.5939008350 Ry
> new unit-cell volume = 196.26255 a.u.^3 ( 29.08311 Ang^3 )
>
>CELL_PARAMETERS (alat)
> 0.850885542 -0.000000001 0.000009624
> -0.425442771 0.736893797 -0.000004810
> 0.000015404 0.000000004 1.361589938
>
>ATOMIC_POSITIONS (crystal)
>Zn 0.333283929 0.666666020 0.000176085
>Zn 0.666617909 0.333333981 0.500176085
>O 0.333282225 0.666666288 0.381723915
>O 0.666615937 0.333333711 0.881723915
>
>......
that makes me very suspicious about a so big reduction of the unit-cell
volume.
I know that there are a lot of variables that can influence this result (not
only the pseudopotential), but since I am a dummy in creating them I wonder
if
someone can give me few hints in order to improve my ones. or even better if
someone could share an already tested NCPP at PBE level I would really
appreciate it.
Thanks in advance
Very best,
Giacomo
Giacomo Giorgi, Ph. D.,
Department of Chemical System Engineering,
School of Engineering, The University of Tokyo,
Japan
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