[Pw_forum] Graphene Structural Relaxation
Gabriele Sclauzero
sclauzer at sissa.it
Thu Aug 19 14:04:19 CEST 2010
In my opinion your input structure is wrong. It's very curious that it
still looks good when visualized with xcrysden.
If you run pw.x with verbosity='high', you will get the atomic positions
in crystal coordinates, as follows
Crystallographic axes
site n. atom positions (cryst. coord.)
1 C tau( 1) = ( -0.5001249 -0.3326688 0.0000000 )
2 C tau( 2) = ( -0.7501874 -0.2499829 0.0000000 )
3 C tau( 3) = ( -0.7501874 -0.0826851 0.0000000 )
4 C tau( 4) = ( 0.0000000 -0.3326688 0.0000000 )
5 C tau( 5) = ( -0.2500625 -0.2499829 0.0000000 )
6 C tau( 6) = ( -0.2500625 -0.0826851 0.0000000 )
7 C tau( 7) = ( -0.5001249 0.0000000 0.0000000 )
8 C tau( 8) = ( -0.5001249 0.1672981 0.0000000 )
9 C tau( 9) = ( -0.7501874 0.2499829 0.0000000 )
10 C tau( 10) = ( -0.7501874 0.4172810 0.0000000 )
11 C tau( 11) = ( 0.5001249 -0.3326688 0.0000000 )
12 C tau( 12) = ( 0.2500625 -0.2499829 0.0000000 )
13 C tau( 13) = ( 0.2500625 -0.0826851 0.0000000 )
14 C tau( 14) = ( 0.0000000 0.0000000 0.0000000 )
15 C tau( 15) = ( 0.0000000 0.1672981 0.0000000 )
16 C tau( 16) = ( -0.2500625 0.2499829 0.0000000 )
17 C tau( 17) = ( -0.2500625 0.4172810 0.0000000 )
18 C tau( 18) = ( -0.5001249 0.4999669 0.0000000 )
19 C tau( 19) = ( 0.5001249 0.0000000 0.0000000 )
20 C tau( 20) = ( 0.5001249 0.1672981 0.0000000 )
21 C tau( 21) = ( 0.2500625 0.2499829 0.0000000 )
22 C tau( 22) = ( 0.2500625 0.4172810 0.0000000 )
23 C tau( 23) = ( 0.0000000 0.4999669 0.0000000 )
24 C tau( 24) = ( 0.5001249 0.4999669 0.0000000 )
To me it seems that some atoms are almost overlapping. For instance, the
positions of atom 1 and atom 11 differ by a vector nearly equal to the
first lattice vector. I think that you have included also some atoms not
belonging to the cell centered in the orgin when building your cell. Try
to remove the extra atoms.
HTH
GS
On 08/19/2010 11:10 AM, meysam pazoki wrote:
>
>
>
> Dear pwscf users
> Thanks for the answers.As I said,I See the honeycomb structure in
> xcrysden.
> I dont know what is wrong, I have attached the .in file.
> Thanks for considering my question
> Regards
> meysam Pazoki
> PhD. student of physics
> sharif university of technology
>
>
>
> _______________________________________________
> Pw_forum mailing list
> Pw_forum at pwscf.org
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>
--
Gabriele Sclauzero, EPFL SB ITP CSEA
PH H2 462, Station 3, CH-1015 Lausanne
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