[Pw_forum] "charge is wrong" error

Aihua Zhang zah7903 at gmail.com
Mon Mar 2 14:49:53 CET 2009


Unfortunately, the problem seems not due to insufficient number of bands.
The number of total electrons is 96 and I increased nbnd to 78, and the
error still occurs. As it occurs during the first step of SCF, I don't think
the tags in &ions have an effect. Here is the output file. Please have a
kind look. Thanks.

------------------------------------------------------------------------------------------

     Program PWSCF     v.4.0.4  starts ...
     Today is  2Mar2009 at 21:26:47

     Parallel version (MPI)

     Number of processors in use:       8
     R & G space division:  proc/pool =    8

     For Norm-Conserving or Ultrasoft (Vanderbilt) Pseudopotentials or PAW

     Current dimensions of program pwscf are:
     Max number of different atomic species (ntypx) = 10
     Max number of k-points (npk) =  40000
     Max angular momentum in pseudopotentials (lmaxx) =  3

     Iterative solution of the eigenvalue problem

     a parallel distributed memory algorithm will be used,
     eigenstates matrixes will be distributed block like on
     ortho sub-group =    2*   2 procs


     Planes per process (thick) : nr3 =324 npp =  41 ncplane = 2025
     Planes per process (smooth): nr3s=240 npps=  30 ncplanes=  900

     Proc/  planes cols     G    planes cols    G      columns  G
     Pool       (dense grid)       (smooth grid)      (wavefct grid)
       1     41    161    34713   30     85    13519     27     2217
       2     41    161    34699   30     85    13533     25     2211
       3     41    161    34695   30     86    13506     27     2217
       4     41    162    34702   30     85    13511     27     2219
       5     40    161    34695   30     85    13501     27     2219
       6     40    161    34695   30     85    13497     27     2215
       7     40    161    34693   30     85    13503     27     2217
       8     40    161    34695   30     85    13499     26     2210
     tot    324   1289   277587  240    681   108069    213    17725



     bravais-lattice index     =            6
     lattice parameter (a_0)   =       7.3400  a.u.
     unit-cell volume          =    3163.5752 (a.u.)^3
     number of atoms/cell      =           11
     number of atomic types    =            2
     number of electrons       =        96.00
     number of Kohn-Sham states=           78
     kinetic-energy cutoff     =      40.0000  Ry
     charge density cutoff     =     300.0000  Ry
     convergence threshold     =      1.0E-08
     mixing beta               =       0.7000
     number of iterations used =            8  plain     mixing
     Exchange-correlation      =  SLA  PW   PBE  PBE (1434)
     nstep                     =           50


     celldm(1)=   7.340000  celldm(2)=   0.000000  celldm(3)=   8.000000
     celldm(4)=   0.000000  celldm(5)=   0.000000  celldm(6)=   0.000000

     crystal axes: (cart. coord. in units of a_0)
               a(1) = (  1.000000  0.000000  0.000000 )
               a(2) = (  0.000000  1.000000  0.000000 )
               a(3) = (  0.000000  0.000000  8.000000 )

     reciprocal axes: (cart. coord. in units 2 pi/a_0)
               b(1) = (  1.000000  0.000000  0.000000 )
               b(2) = (  0.000000  1.000000  0.000000 )
               b(3) = (  0.000000  0.000000  0.125000 )


     PseudoPot. # 1 for Rh read from file Rh.pbe-rrkjus.UPF
     Pseudo is Ultrasoft, Zval =  9.0
     Generated by new atomic code, or converted to UPF format
     Using radial grid of 1191 points,  3 beta functions with:
                l(1) =   1
                l(2) =   2
                l(3) =   2
     Q(r) pseudized with 0 coefficients


     PseudoPot. # 2 for O  read from file O.pbe-rrkjus.UPF
     Pseudo is Ultrasoft, Zval =  6.0
     Generated by new atomic code, or converted to UPF format
     Using radial grid of 1269 points,  4 beta functions with:
                l(1) =   0
                l(2) =   0
                l(3) =   1
                l(4) =   1
     Q(r) pseudized with 0 coefficients


     atomic species   valence    mass     pseudopotential
        Rh             9.00   102.90550     Rh( 1.00)
        O              6.00    15.99940     O ( 1.00)

      8 Sym.Ops. (no inversion)

                                    s                        frac. trans.

      isym =  1     identity

 cryst.   s( 1) = (     1          0          0      )
                  (     0          1          0      )
                  (     0          0          1      )

 cart.    s( 1) = (  1.0000000  0.0000000  0.0000000 )
                  (  0.0000000  1.0000000  0.0000000 )
                  (  0.0000000  0.0000000  1.0000000 )


      isym =  2     180 deg rotation - cart. axis [0,0,1]

 cryst.   s( 2) = (    -1          0          0      )
                  (     0         -1          0      )
                  (     0          0          1      )

 cart.    s( 2) = ( -1.0000000  0.0000000  0.0000000 )
                  (  0.0000000 -1.0000000  0.0000000 )
                  (  0.0000000  0.0000000  1.0000000 )


      isym =  3      90 deg rotation - cart. axis [0,0,-1]

 cryst.   s( 3) = (     0         -1          0      )
                  (     1          0          0      )
                  (     0          0          1      )

 cart.    s( 3) = (  0.0000000  1.0000000  0.0000000 )
                  ( -1.0000000  0.0000000  0.0000000 )
                  (  0.0000000  0.0000000  1.0000000 )


      isym =  4      90 deg rotation - cart. axis [0,0,1]

 cryst.   s( 4) = (     0          1          0      )
                  (    -1          0          0      )
                  (     0          0          1      )

 cart.    s( 4) = (  0.0000000 -1.0000000  0.0000000 )
                  (  1.0000000  0.0000000  0.0000000 )
                  (  0.0000000  0.0000000  1.0000000 )


      isym =  5     inv. 180 deg rotation - cart. axis [0,1,0]

 cryst.   s( 5) = (     1          0          0      )
                  (     0         -1          0      )
                  (     0          0          1      )

 cart.    s( 5) = (  1.0000000  0.0000000  0.0000000 )
                  (  0.0000000 -1.0000000  0.0000000 )
                  (  0.0000000  0.0000000  1.0000000 )


      isym =  6     inv. 180 deg rotation - cart. axis [1,0,0]

 cryst.   s( 6) = (    -1          0          0      )
                  (     0          1          0      )
                  (     0          0          1      )

 cart.    s( 6) = ( -1.0000000  0.0000000  0.0000000 )
                  (  0.0000000  1.0000000  0.0000000 )
                  (  0.0000000  0.0000000  1.0000000 )


      isym =  7     inv. 180 deg rotation - cart. axis [1,1,0]

 cryst.   s( 7) = (     0         -1          0      )
                  (    -1          0          0      )
                  (     0          0          1      )

 cart.    s( 7) = (  0.0000000 -1.0000000  0.0000000 )
                  ( -1.0000000  0.0000000  0.0000000 )
                  (  0.0000000  0.0000000  1.0000000 )


      isym =  8     inv. 180 deg rotation - cart. axis [1,-1,0]

 cryst.   s( 8) = (     0          1          0      )
                  (     1          0          0      )
                  (     0          0          1      )

 cart.    s( 8) = (  0.0000000  1.0000000  0.0000000 )
                  (  1.0000000  0.0000000  0.0000000 )
                  (  0.0000000  0.0000000  1.0000000 )


     point group C_4v (4mm)
     there are  5 classes
     the character table:

       E     2C4   C2    2s_v  2s_d
A_1    1.00  1.00  1.00  1.00  1.00
A_2    1.00  1.00  1.00 -1.00 -1.00
B_1    1.00 -1.00  1.00  1.00 -1.00
B_2    1.00 -1.00  1.00 -1.00  1.00
E      2.00  0.00 -2.00  0.00  0.00

     the symmetry operations in each class:
     E        1
     C2       2
     2C4      3    4
     2s_v     5    6
     2s_d     7    8

   Cartesian axes

     site n.     atom                  positions (a_0 units)
         1           Rh  tau(  1) = (   0.0000000   0.0000000   0.0000000  )
         2           Rh  tau(  2) = (   0.5000000   0.5000000   0.0000000  )
         3           Rh  tau(  3) = (   0.5000000   0.0000000   0.5000000  )
         4           Rh  tau(  4) = (   0.0000000   0.5000000   0.5000000  )
         5           Rh  tau(  5) = (   0.0000000   0.0000000   1.0000000  )
         6           Rh  tau(  6) = (   0.5000000   0.5000000   1.0000000  )
         7           Rh  tau(  7) = (   0.5000000   0.0000000   1.5000000  )
         8           Rh  tau(  8) = (   0.0000000   0.5000000   1.5000000  )
         9           Rh  tau(  9) = (   0.0000000   0.0000000   2.0000000  )
        10           Rh  tau( 10) = (   0.5000000   0.5000000   2.0000000  )
        11           O   tau( 11) = (   0.5000000   0.5000000   2.5177112  )

   Crystallographic axes

     site n.     atom                  positions (cryst. coord.)
         1           Rh  tau(  1) = (  0.0000000  0.0000000  0.0000000  )
         2           Rh  tau(  2) = (  0.5000000  0.5000000  0.0000000  )
         3           Rh  tau(  3) = (  0.5000000  0.0000000  0.0625000  )
         4           Rh  tau(  4) = (  0.0000000  0.5000000  0.0625000  )
         5           Rh  tau(  5) = (  0.0000000  0.0000000  0.1250000  )
         6           Rh  tau(  6) = (  0.5000000  0.5000000  0.1250000  )
         7           Rh  tau(  7) = (  0.5000000  0.0000000  0.1875000  )
         8           Rh  tau(  8) = (  0.0000000  0.5000000  0.1875000  )
         9           Rh  tau(  9) = (  0.0000000  0.0000000  0.2500000  )
        10           Rh  tau( 10) = (  0.5000000  0.5000000  0.2500000  )
        11           O   tau( 11) = (  0.5000000  0.5000000  0.3147139  )

     number of k points=   10  gaussian broad. (Ry)=  0.0200     ngauss =
1
                       cart. coord. in units 2pi/a_0
        k(    1) = (   0.0000000   0.0000000   0.0000000), wk =   0.0555556
        k(    2) = (   0.0000000   0.1666667   0.0000000), wk =   0.2222222
        k(    3) = (   0.0000000   0.3333333   0.0000000), wk =   0.2222222
        k(    4) = (   0.0000000  -0.5000000   0.0000000), wk =   0.1111111
        k(    5) = (   0.1666667   0.1666667   0.0000000), wk =   0.2222222
        k(    6) = (   0.1666667   0.3333333   0.0000000), wk =   0.4444444
        k(    7) = (   0.1666667  -0.5000000   0.0000000), wk =   0.2222222
        k(    8) = (   0.3333333   0.3333333   0.0000000), wk =   0.2222222
        k(    9) = (   0.3333333  -0.5000000   0.0000000), wk =   0.2222222
        k(   10) = (  -0.5000000  -0.5000000   0.0000000), wk =   0.0555556

                       cryst. coord.
        k(    1) = (   0.0000000   0.0000000   0.0000000), wk =   0.0555556
        k(    2) = (   0.0000000   0.1666667   0.0000000), wk =   0.2222222
        k(    3) = (   0.0000000   0.3333333   0.0000000), wk =   0.2222222
        k(    4) = (   0.0000000  -0.5000000   0.0000000), wk =   0.1111111
        k(    5) = (   0.1666667   0.1666667   0.0000000), wk =   0.2222222
        k(    6) = (   0.1666667   0.3333333   0.0000000), wk =   0.4444444
        k(    7) = (   0.1666667  -0.5000000   0.0000000), wk =   0.2222222
        k(    8) = (   0.3333333   0.3333333   0.0000000), wk =   0.2222222
        k(    9) = (   0.3333333  -0.5000000   0.0000000), wk =   0.2222222
        k(   10) = (  -0.5000000  -0.5000000   0.0000000), wk =   0.0555556

     G cutoff =  409.4055  ( 277587 G-vectors)     FFT grid: ( 45, 45,324)
     G cutoff =  218.3496  ( 108069 G-vectors)  smooth grid: ( 30, 30,240)

     Largest allocated arrays     est. size (Mb)     dimensions
        Kohn-Sham Wavefunctions         2.04 Mb     (   1714,  78)
        NL pseudopotentials             3.61 Mb     (   1714, 138)
        Each V/rho on FFT grid          1.27 Mb     (  83025)
        Each G-vector array             0.26 Mb     (  34713)
        G-vector shells                 0.03 Mb     (   4389)
     Largest temporary arrays     est. size (Mb)     dimensions
        Each subspace H/S matrix        0.09 Mb     (     78,  78)
        Each <psi_i|beta_j> matrix      0.16 Mb     (    138,  78)
        Arrays for rho mixing          10.13 Mb     (  83025,   8)

     Initial potential from superposition of free atoms

     starting charge   95.99298, renormalised to   96.00000

     negative rho (up, down):  0.422E-04 0.000E+00
     Starting wfc are   64 atomic +   14 random wfc

     total cpu time spent up to now is      7.86 secs

     per-process dynamical memory:    64.3 Mb

     Self-consistent Calculation

     iteration #  1     ecut=    40.00 Ry     beta=0.70
     CG style diagonalization
     ethr =  1.00E-02,  avg # of iterations =  4.3

     negative rho (up, down):  0.222E-04 0.000E+00

     total cpu time spent up to now is    126.56 secs

     WARNING: integrated charge=    95.75373487, expected=    96.00000000

 %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
     from electrons : error #         1
     charge is wrong
 %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%

     stopping ...

------------------------------------------------------------------------------------------


Best

Zhang

On Mon, Mar 2, 2009 at 9:06 PM, Aihua Zhang <zah7903 at gmail.com> wrote:

> Dear Eyvaz and Paolo,
>
> Thanks for the prompt suggestions. I'll check if it works soon.
> My affiliation should be in the below signature now. :)
>
> Best
>
> Zhang
>
>
> On Mon, Mar 2, 2009 at 8:06 PM, Paolo Giannozzi <giannozz at democritos.it>wrote:
>
>> Paolo Giannozzi wrote:
>>
>> > If not, please provide an input and and an output
>>
>> actually an output is sufficient, since the input was
>> already in your message
>>
>> P.
>> --
>> Paolo Giannozzi, Democritos and University of Udine, Italy
>> _______________________________________________
>> Pw_forum mailing list
>> Pw_forum at pwscf.org
>> http://www.democritos.it/mailman/listinfo/pw_forum
>>
>
>
>
> --
> ------------------------------------------------------------------
> Research Fellow,
> Dept. of Physics, National Univ. of Singapore
> 10 Kent Ridge Crescent, Singapore, 119260
> Tel: +65 6516 7844
> ------------------------------------------------------------------
>
>


-- 
------------------------------------------------------------------
Research Fellow,
Dept. of Physics, National Univ. of Singapore
10 Kent Ridge Crescent, Singapore, 119260
Tel: +65 6516 7844
------------------------------------------------------------------
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