[Pw_forum] Projection, convergence and imaginary phonon frequencies
John Kendrick
J.Kendrick at Bradford.ac.uk
Mon Jan 12 12:41:46 CET 2009
Hi,
I have been doing some calculations recently on molecular crystals.
Because of our interest in the lowest phonon frequencies I have been
concerned that translational invariance is maintained as far as
possible. To this end I have increased the accuracy of the optimisation
and the scf convergence, to a point where I cannot see how to converge
the calculation any tighter. I noticed that the norm conserving
pseudopotentials were having greater difficulties than the others. In
particular for one molecule I have seen significant differences between
the different projection schemes that ensure translational invariance.
Particularly the intensities in the infrared a very different. Below is
some output from a representative calculation.
Crystal Projection
# mode [cm-1] [THz] IR Raman depol
1 0.00 0.0000 0.0000 0.0011 0.7500
2 0.00 0.0000 0.0000 0.0043 0.7500
3 0.00 0.0000 0.0000 0.0047 0.7500
4 22.00 0.6596 0.0000 6.7060 0.7500
5 56.93 1.7067 0.0033 0.1326 0.7500
6 56.93 1.7067 0.0033 0.1326 0.7500
7 73.28 2.1969 0.0000 9.8083 0.6361
8 82.51 2.4737 0.0000 0.0000 0.7422
9 83.26 2.4960 0.2348 0.0334 0.7500
10 83.26 2.4960 0.2348 0.0334 0.7500
NOASR No Projection
# mode [cm-1] [THz] IR Raman depol
1 -52.77 -1.5820 0.0016 0.7753 0.7500
2 22.00 0.6596 0.0000 6.7060 0.7500
3 44.67 1.3392 0.0147 0.4140 0.7500
4 44.67 1.3392 0.0147 0.4140 0.7500
5 72.20 2.1646 0.0211 0.0034 0.7500
6 72.20 2.1646 0.0211 0.0034 0.7500
7 73.28 2.1969 0.0000 9.8083 0.6361
8 82.51 2.4737 0.0000 0.0000 0.7425
9 83.79 2.5120 0.0000 0.1142 0.7500
10 84.69 2.5390 0.2889 0.6525 0.7500
SIMPLE Projection
# mode [cm-1] [THz] IR Raman depol
1 -1.31 -0.0394 0.0000 0.0120 0.7500
2 -1.31 -0.0394 0.0000 0.0120 0.7500
3 -0.92 -0.0277 0.0000 0.0010 0.7500
4 39.67 1.1893 0.0001 0.4896 0.7500
5 39.67 1.1893 0.0001 0.4896 0.7500
6 51.30 1.5380 0.0000 2.9853 0.7120
7 60.39 1.8104 0.0000 6.5707 0.7500
8 61.02 1.8293 0.0040 2.8566 0.7500
9 61.02 1.8293 0.0040 2.8566 0.7500
10 61.94 1.8570 0.0000 0.0000 0.7499
11 68.41 2.0507 0.0000 7.7313 0.7500
12 76.98 2.3078 0.1318 0.0930 0.7500
13 76.98 2.3078 0.1318 0.0930 0.7500
Should I be looking at
the energy cutoff - 80Ryd?
the kspace integration - 1 1 2?
The unit cell is approximately 9X9X6 angstrom
Other convergence thresholds?
There maybe some meshes used for integration that could still help
improve the calculation or perhaps an approach to further tightening the
optimisation. Or this maybe as good as it gets? I was wondering if
anyone had any experience they could offer.
Input to the optimisation step looks like this.
&CONTROL
restart_mode = 'restart',
calculation = 'relax' ,
outdir = '.' ,
pseudo_dir = '/home/jkendric/Data/PseudoPotentials' ,
disk_io = 'minimal' ,
nstep = 200,
etot_conv_thr = 1.0D-6,
forc_conv_thr = 1.0D-5,
/
&SYSTEM
ibrav = 0,
celldm(1) = 1.8897262,
nat = 58,
ntyp = 4,
ecutwfc = 80.D0 ,
occupations = 'fixed' ,
/
&ELECTRONS
conv_thr = 1.D-11 ,
mixing_beta = 0.3D0 ,
/
&IONS
ion_dynamics = 'bfgs'
pot_extrapolation = 'second_order' ,
wfc_extrapolation = 'second_order' ,
/
CELL_PARAMETERS cubic
9.3027 0.0 0.0
0.0 9.3027 0.0
0.0 0.0 6.6403
ATOMIC_SPECIES
C 12.01070 C.blyp-mt.UPF
N 14.00674 N.blyp-mt.UPF
O 15.99940 O.blyp-mt.UPF
H 1.00794 H.blyp-vbc.UPF
ATOMIC_POSITIONS crystal
C 0.500000000 0.500000000 0.000000000
C 0.623684469 0.560707616 0.129462381
H 0.717493110 0.584367933 0.037673510
H 0.590256782 0.657115895 0.209561631
.....
K_POINTS automatic
1 1 2 0 0 0
Energies in the output file look like this
! total energy = -1055.84030152 Ry
! total energy = -1055.83327033 Ry
! total energy = -1055.84030145 Ry
! total energy = -1055.84030152 Ry
! total energy = -1055.84030153 Ry
! total energy = -1055.84030153 Ry
! total energy = -1055.84030154 Ry
! total energy = -1055.84030154 Ry
! total energy = -1055.84030154 Ry
Total force = 0.000129 Total SCF correction = 0.000006
Input to the phonon calculations looks like this
Phonons at Gamma Point with raman
&inputph
tr2_ph=1.0d-18,
epsil=.true.,
lraman=.true.,
outdir='.',
fildyn='petn.dynG',
/
0.0 0.0 0.0
Thanks.
John Kendrick
University of Bradford
Bradford BD13 1DP
UK
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