[Pw_forum] Insufficient Virtual Memory

Vo, Trinh trinh.vo at jpl.nasa.gov
Thu Feb 26 23:50:14 CET 2009


Dear Axel,

Yes, I read the README file.   I first just run "run_example" to get the input files (I wanted to see what they are).  I then run each job individually.  Since I saw in one of previous emails, you mentioned the following link, which is related to the benchmark of the 8cores:
http://cp2k.googlegroups.com/web/cp2k-water-bench-cmm.png?gda=cZtL20oAAABKcjB2R2-kyOTBNGr0GXCNfKm1opB3ppoZQi3FVKdigwDOq5Mi_ip_cCKVysjiE_BA1utot6QxKJxvVe1Mw7MU_e3Wg0GnqfdKOwDqUih1tA

In the plot, I saw the result for 512 H2O and 4core/nodes.  Thus, I tried to repeat all the calculations to compare, but I could not run that case.

Thank you,

Trinh    



-----Original Message-----
From: pw_forum-bounces at pwscf.org [mailto:pw_forum-bounces at pwscf.org] On Behalf Of Axel Kohlmeyer
Sent: Thursday, February 26, 2009 1:04 PM
To: PWSCF Forum
Subject: Re: [Pw_forum] Insufficient Virtual Memory

On Thu, 26 Feb 2009, Vo, Trinh wrote:

TV> Dear PWSCF users,
TV> 
TV> I was running a benchmark (using example21 in QE) for my computer cluster (total 18 nodes) to compare the results with those posted on web link that was mentioned by Axel in some previous forum emails..
TV> 
TV> When I performed the calculation for the case of 512 H2O with 4cores/node, the job crashed with the error:
TV> 
TV>  "forrtl: severe (41): insufficient virtual memory".
TV> 

TV> I do not know how to deal with this.  Any help or suggestion is 
TV> appreciated.  For other cases, the runs were fine.

have you _read_ the README file in that directory???

axel.


TV> 
TV> Below are the specifications of my cluster:
TV> 
TV> Intel CPU Xeon X5450 Quad Core 3.0GHz with 12M cache 133MHz FSB
TV> DDRII667 4GB RAM FBD ECC (D-667D2D4F5/4GB)
TV> 
TV> For compilation, I used the following:
TV> QE ver. 4.0.3
TV> ifort 10.1015, MKL  10.0.3.020, impi 3.1
TV> internal fftw
TV> 
TV> I also attach here the output file.
TV> 
TV> 
TV> Thank you,
TV> 
TV> Trinh Vo
TV> 
TV> 
TV> 
TV> 
TV> 

-- 
=======================================================================
Axel Kohlmeyer   akohlmey at cmm.chem.upenn.edu   http://www.cmm.upenn.edu
   Center for Molecular Modeling   --   University of Pennsylvania
Department of Chemistry, 231 S.34th Street, Philadelphia, PA 19104-6323
tel: 1-215-898-1582,  fax: 1-215-573-6233,  office-tel: 1-215-898-5425
=======================================================================
If you make something idiot-proof, the universe creates a better idiot.
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