[Pw_forum] String method example?
Nguyen Ngoc Ha
nguyenhalvt at yahoo.com
Mon Oct 13 16:15:59 CEST 2008
Dear PWscf users,
I like using SMD and Metadynamics to investigate free energy suface (That implemented in PWscf code) but I see there are so few of examples for SMD.
For testing purpose only with phase_space = 'coarse-grained', I'm still failed.
Here is my input:
...
&IONS
ion_dynamics = 'damp' ,
phase_space = 'coarse-grained' ,
pot_extrapolation = 'second_order' ,
wfc_extrapolation = 'second_order' ,
remove_rigid_rot = .false. ,
num_of_images = 5 ,
opt_scheme = 'langevin' ,
temp_req = 298 ,
ds = 1. ,
path_thr = 0.1D0 ,
use_freezing = .false. ,
use_masses = .true. ,
/
ATOMIC_SPECIES
H 1.00794 HUSPBE.RRKJ3
ATOMIC_POSITIONS angstrom
first_image
H -2.416592653 0.000000000 0.000000000 1 0 0
H 0.000000000 0.000000000 0.000000000 0 0 0
H 0.824334341 0.000000000 0.000000000 1 0 0
last_image
H -0.824334341 0.000000000 0.000000000
H 0.000000000 0.000000000 0.000000000
H 2.416592653 0.000000000 0.000000000
K_POINTS gamma
Then I get the following message:
...
from read_cards : error # 1
wrong number of columns in ATOMIC_POSITIONS
...
I don't know what's wrong with my input (why is ATOMIC_POSITIONS indicated?)
Thank you for your help.
Nguyen, Ngoc Ha
Hanoi National University of Education
Faculty of Chemistry
Department of Physical Chemistry
Tel: Office: 04/8330842
Home: 04/7891674
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