<div dir="ltr"><div>I am pretty sure it is a problem of mismatch between QE and Libxc compilers, but I should know the compilation details of Libxc. If you want to recompile Libxc you should follow the instructions here:</div><div><a href="https://www.tddft.org/programs/libxc/installation/">https://www.tddft.org/programs/libxc/installation/</a></div><div>after loading the same compilers you have chosen for QE. Then recompile QE.<br></div></div><br><div class="gmail_quote"><div dir="ltr" class="gmail_attr">On Mon, Jul 19, 2021 at 8:13 PM <a href="mailto:tanghong992@outlook.com">tanghong992@outlook.com</a> <<a href="mailto:tanghong992@gmail.com">tanghong992@gmail.com</a>> wrote:<br></div><blockquote class="gmail_quote" style="margin:0px 0px 0px 0.8ex;border-left:1px solid rgb(204,204,204);padding-left:1ex"><div style="overflow-wrap: break-word;" lang="EN-US"><div class="gmail-m_-1100322626814685666WordSection1"><pre style="background:white none repeat scroll 0% 0%"><span style="color:black">Dear </span><span style="font-size:10.5pt;font-family:Courier;color:black">Fabrizio,</span><u></u><u></u></pre><p class="MsoNormal"><u></u> <u></u></p><p class="MsoNormal">Do you think this is because libxc.5.1.5 was not compiled with intel compiler? I can check with our HPC team. </p><p class="MsoNormal">Please give me the advice how I should compile libxc.5.1.5? </p><p class="MsoNormal"><u></u> <u></u></p><p class="MsoNormal">Best,</p><p class="MsoNormal">Hong</p><p class="MsoNormal"><u></u> <u></u></p><p class="MsoNormal"><u></u> <u></u></p><p class="MsoNormal"><u></u> <u></u></p><p class="MsoNormal">Sent from <a href="https://go.microsoft.com/fwlink/?LinkId=550986" target="_blank">Mail</a> for Windows 10</p><p class="MsoNormal"><u></u> <u></u></p><div style="border-color:rgb(225,225,225) currentcolor currentcolor;border-style:solid none none;border-width:1pt medium medium;padding:3pt 0in 0in"><p class="MsoNormal" style="border:medium none;padding:0in"><b>From: </b><a href="mailto:tanghong992@gmail.com" target="_blank">tanghong992@outlook.com</a><br><b>Sent: </b>Monday, July 19, 2021 2:04 PM<br><b>To: </b><a href="mailto:ferrariruffino.fz@gmail.com" target="_blank">Fabrizio Ferrari</a><br><b>Subject: </b>RE: [QE-users] Install QE 6.4.1 or QE 6.6 with Libxc.5.1.5 errors</p></div><p class="MsoNormal"><u></u> <u></u></p><p class="MsoNormal">I don know how libxc.5.1.5 was compiled. It was done by our Temple HPC team. But I saw is was libxc/5.1.5-intel. It should be compiled with intel compiler.<u></u><u></u></p><p class="MsoNormal"><u></u> <u></u></p><p class="MsoNormal">Best,<u></u><u></u></p><p class="MsoNormal">Hong<u></u><u></u></p><p class="MsoNormal"><u></u> <u></u></p><p class="MsoNormal"><u></u> <u></u></p><p class="MsoNormal">Sent from <a href="https://go.microsoft.com/fwlink/?LinkId=550986" target="_blank">Mail</a> for Windows 10<u></u><u></u></p><p class="MsoNormal"><u></u> <u></u></p><div style="border-color:rgb(225,225,225) currentcolor currentcolor;border-style:solid none none;border-width:1pt medium medium;padding:3pt 0in 0in"><p class="MsoNormal"><b>From: </b><a href="mailto:ferrariruffino.fz@gmail.com" target="_blank">Fabrizio Ferrari</a><br><b>Sent: </b>Monday, July 19, 2021 2:01 PM<br><b>To: </b><a href="mailto:tanghong992@gmail.com" target="_blank">tanghong992@gmail.com</a><br><b>Subject: </b>Re: [QE-users] Install QE 6.4.1 or QE 6.6 with Libxc.5.1.5 errors<u></u><u></u></p></div><p class="MsoNormal"><u></u> <u></u></p><div><p class="MsoNormal">Sorry, I see now from make.inc that you used ifort+icc. Did you compile libxc the same way?<u></u><u></u></p></div><p class="MsoNormal"><u></u> <u></u></p><div><div><p class="MsoNormal">On Mon, Jul 19, 2021 at 7:59 PM Fabrizio Ferrari <<a href="mailto:ferrariruffino.fz@gmail.com" target="_blank">ferrariruffino.fz@gmail.com</a>> wrote:<u></u><u></u></p></div><blockquote style="border-color:currentcolor currentcolor currentcolor rgb(204,204,204);border-style:none none none solid;border-width:medium medium medium 1pt;padding:0in 0in 0in 6pt;margin:5pt 0in 5pt 4.8pt"><div><div><p class="MsoNormal" style="margin-left:0.2in">Dear Hong,<u></u><u></u></p></div><div><p class="MsoNormal" style="margin-left:0.2in">which compiler did you use to compile QE6.7? And which one for Libxc?<u></u><u></u></p></div></div><p class="MsoNormal" style="margin-left:0.2in"><u></u> <u></u></p><div><div><p class="MsoNormal" style="margin-left:0.2in">On Mon, Jul 19, 2021 at 7:53 PM <a href="mailto:tanghong992@outlook.com" target="_blank">tanghong992@outlook.com</a> <<a href="mailto:tanghong992@gmail.com" target="_blank">tanghong992@gmail.com</a>> wrote:<u></u><u></u></p></div><blockquote style="border-color:currentcolor currentcolor currentcolor rgb(204,204,204);border-style:none none none solid;border-width:medium medium medium 1pt;padding:0in 0in 0in 6pt;margin:5pt 0in 5pt 4.8pt"><div><div><div><pre style="background:white none repeat scroll 0% 0%"><span style="color:black">Dear </span><span style="font-size:10.5pt;font-family:Courier;color:black">Fabrizio,</span></pre><pre style="background:white none repeat scroll 0% 0%"><span style="font-size:10.5pt;font-family:Courier;color:black"> </span></pre><pre style="background:white none repeat scroll 0% 0%"><span style="font-size:10.5pt;font-family:Courier;color:black">Thank you so much for helping me. </span></pre><pre style="background:white none repeat scroll 0% 0%"><span style="font-size:10.5pt;font-family:Courier;color:black">Actually, before your this email, I tried to do qe.6.7.+libxc.5.1.5. I think I did what you said. I still got errors. My doing is:</span></pre><div><p class="MsoNormal" style="margin-left:0.4in">1<span style="color:black">. I followed your advices for other people in the email lists</span><u></u><u></u></p><p class="MsoNormal" style="margin-left:0.4in"><span style="font-size:10.5pt;font-family:Courier;color:black"> </span><span style="color:black">1-configure without any libxc flag;</span><u></u><u></u></p><p class="MsoNormal" style="margin-left:0.4in"><span style="color:black"> 2-go to the make.inc file in the main folder and add the various flags to </span><u></u><u></u></p><p class="MsoNormal" style="margin-left:0.4in"><span style="color:black"> DFLAGS, IFLAGS and LD_LIBS by following the comments inside; </span><u></u><u></u></p><p class="MsoNormal" style="margin-left:0.4in"><span style="color:black"> 3-compile as usual.</span><u></u><u></u></p><p class="MsoNormal" style="margin-left:0.4in"><span style="color:black"> I found there is “LIBXC_LIBS” in the make.inc file. I also tried to add libxc lib to this one, instead of “LD_LIBS”, however, they all gave the same errors. </span><u></u><u></u></p><p class="MsoNormal" style="margin-left:0.4in"><span style="color:black"> Please see the attached “make.inc” file. </span><u></u><u></u></p><p class="MsoNormal" style="margin-left:0.4in"><span style="color:black"> </span><u></u><u></u></p></div><pre style="background:white none repeat scroll 0% 0%"><span style="font-size:10.5pt;font-family:Courier;color:black">2. after “make all”, I go the following errores:</span></pre><pre style="background:white none repeat scroll 0% 0%"><span style="font-size:10.5pt;font-family:Courier;color:black"> pwscf.o libpw.a ../../Modules/libqemod.a .././KS_Solvers/libks_solvers.a ../../upflib/libupf.a ../../FFTXlib/libqefft.a ../../LAXlib/libqela.a ../../UtilXlib/libutil.a ../../dft-d3/libdftd3qe.a /home/hongtang/QE67_libxc/qe-6.7//clib/clib.a /home/hongtang/QE67_libxc/qe-6.7//LIBBEEF/libbeef.a -L/gpfs/opt/libs/libxc-5.1.5-intel/lib -lxcf03 -lxc -lscalapack -L/home/hongtang/QE67_libxc/qe-6.7//FoX/lib -lFoX_dom -lFoX_sax -lFoX_wxml -lFoX_common -lFoX_utils -lFoX_fsys -lmkl_intel_lp64 -lmkl_intel_thread -lmkl_core </span></pre><pre style="background:white none repeat scroll 0% 0%"><span style="font-size:10.5pt;font-family:Courier;color:black">/gpfs/opt/libs/libxc-5.1.5-intel/lib/libxcf03.a(libxcf03.o): In function `xc_f03_lib_m_mp_xc_f03_functional_get_name_':</span></pre><pre style="background:white none repeat scroll 0% 0%"><span style="font-size:10.5pt;font-family:Courier;color:black">libxcf03.f90:(.text+0xd3b): undefined reference to `libxc_free'</span></pre><pre style="background:white none repeat scroll 0% 0%"><span style="font-size:10.5pt;font-family:Courier;color:black">/gpfs/opt/libs/libxc-5.1.5-intel/lib/libxc.a(func_info.o):(.eh_frame+0x11): undefined reference to `__gxx_personality_v0'</span></pre><pre style="background:white none repeat scroll 0% 0%"><span style="font-size:10.5pt;font-family:Courier;color:black">/gpfs/opt/libs/libxc-5.1.5-intel/lib/libxc.a(functionals.o):(.eh_frame+0x11): undefined reference to `__gxx_personality_v0'</span></pre><pre style="background:white none repeat scroll 0% 0%"><span style="font-size:10.5pt;font-family:Courier;color:black">/gpfs/opt/libs/libxc-5.1.5-intel/lib/libxc.a(hybrids.o):(.eh_frame+0x11): undefined reference to `__gxx_personality_v0'</span></pre><pre style="background:white none repeat scroll 0% 0%"><span style="font-size:10.5pt;font-family:Courier;color:black">/gpfs/opt/libs/libxc-5.1.5-intel/lib/libxc.a(version.o):(.eh_frame+0x11): undefined reference to `__gxx_personality_v0'</span></pre><pre style="background:white none repeat scroll 0% 0%"><span style="font-size:10.5pt;font-family:Courier;color:black">/gpfs/opt/libs/libxc-5.1.5-intel/lib/libxc.a(func_reference.o):(.eh_frame+0x11): undefined reference to `__gxx_personality_v0'</span></pre><pre style="background:white none repeat scroll 0% 0%"><span style="font-size:10.5pt;font-family:Courier;color:black">/gpfs/opt/libs/libxc-5.1.5-intel/lib/libxc.a(lda.o):(.eh_frame+0x11): more undefined references to `__gxx_personality_v0' follow</span></pre><pre style="background:white none repeat scroll 0% 0%"><span style="font-size:10.5pt;font-family:Courier;color:black">make[2]: *** [pw.x] Error 1</span></pre><pre style="background:white none repeat scroll 0% 0%"><span style="font-size:10.5pt;font-family:Courier;color:black">make[2]: Leaving directory `/home/hongtang/QE67_libxc/qe-6.7/PW/src'</span></pre><pre style="background:white none repeat scroll 0% 0%"><span style="font-size:10.5pt;font-family:Courier;color:black">make[1]: *** [pw] Error 1</span></pre><pre style="background:white none repeat scroll 0% 0%"><span style="font-size:10.5pt;font-family:Courier;color:black">make[1]: Leaving directory `/home/hongtang/QE67_libxc/qe-6.7/PW'</span></pre><pre style="background:white none repeat scroll 0% 0%"><span style="font-size:10.5pt;font-family:Courier;color:black">make: *** [pw] Error 1</span></pre><pre style="background:white none repeat scroll 0% 0%"><span style="font-size:10.5pt;font-family:Courier;color:black"> </span></pre><pre style="background:white none repeat scroll 0% 0%"><span style="font-size:10.5pt;font-family:Courier;color:black"> </span></pre><pre style="background:white none repeat scroll 0% 0%"><span style="font-size:10.5pt;font-family:Courier;color:black"> </span></pre><pre style="background:white none repeat scroll 0% 0%"><span style="font-size:10.5pt;font-family:Courier;color:black">Please help.</span></pre><pre style="background:white none repeat scroll 0% 0%"><span style="font-size:10.5pt;font-family:Courier;color:black"> </span></pre><pre style="background:white none repeat scroll 0% 0%"><span style="font-size:10.5pt;font-family:Courier;color:black">Best,</span></pre><pre style="background:white none repeat scroll 0% 0%"><span style="font-size:10.5pt;font-family:Courier;color:black">Hong</span></pre><pre style="background:white none repeat scroll 0% 0%"><span style="font-size:10.5pt;font-family:Courier;color:black"> </span></pre></div><p class="MsoNormal" style="margin-left:0.4in"> <u></u><u></u></p><p class="MsoNormal" style="margin-left:0.4in"> <u></u><u></u></p><p class="MsoNormal" style="margin-left:0.4in"> <u></u><u></u></p><p class="MsoNormal" style="margin-left:0.4in"> <u></u><u></u></p><p class="MsoNormal" style="margin-left:0.4in">Sent from <a href="https://go.microsoft.com/fwlink/?LinkId=550986" target="_blank">Mail</a> for Windows 10<u></u><u></u></p></div></div></blockquote></div></blockquote></div><p class="MsoNormal" style="margin-left:9.6pt"> <u></u><u></u></p><p class="MsoNormal"><u></u> <u></u></p><p class="MsoNormal"><u></u> <u></u></p></div></div>
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