<table cellspacing="0" cellpadding="0" border="0" ><tr><td valign="top" style="font: inherit;">Dear All: <br><br>By running the given input file for pw.x I get the error:<br><br><br>%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%<br> from check_atoms : error # 1<br> atoms # 1 and # 2 overlap!<br>%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%<br>Although I checked the input by XCRYSDEN visualization program and nothing is wrong.<br> I appreciate any help.<br><br>Best Regard<br><br>Mohamed<br>###################################################################<br><br>&CONTROL<br> calculation = 'scf' ,<br>
prefix='cu3nbs4'<br> restart_mode = 'from_scratch' ,<br> outdir = '$TMP_DIR/' ,<br> pseudo_dir = '/home/mohamed/espresso/exec/pseudo' ,<br> verbosity = 'default' ,<br><br> /<br> &SYSTEM<br> ibrav=1<br> celldm(1)= 10.397
,<br> nat = 20,<br> ntyp = 3,<br> ecutwfc = 60. ,<br> nbnd=90,<br> /<br> &ELECTRONS<br> conv_thr=1.0D-8 ,<br> /<br>ATOMIC_SPECIES<br> Nb 92.9064 Nb.pbe-sR-sc-us.UPF<br> Cu 63.546 Cu.pbe-sR-us.UPF<br> S 32.06
S.pbe-van-bm.UPF<br> ATOMIC_POSITIONS crystal<br>Nb 0.000000000 0.000000000 0.000000000<br>Nb -1.000000000 0.000000000 0.000000000<br>Nb 0.000000000 0.000000000 -1.000000000<br>Nb 1.000000000 0.000000000 0.000000000<br>Cu 0.500000000 0.000000000 0.000000000<br>Cu 0.000000000 0.000000000 -0.500000000<br>Cu -0.500000000
0.000000000 0.000000000<br>Cu 0.000000000 -0.500000000 0.000000000<br>Cu 0.000000000 0.500000000 0.000000000<br>Cu 0.000000000 0.000000000 0.500000000<br>S 0.242599953 0.242599953 0.242599953<br>S 0.242599953 -0.242599953 -0.242599953<br>S -0.242599953 0.242599953 -0.242599953<br>S -0.242599953
-0.242599953 0.242599953<br>S -0.757400047 0.242599953 0.242599953<br>S 0.242599953 0.242599953 -0.757400047<br>S -0.757400047 -0.242599953 -0.242599953<br>S 0.757400047 0.242599953 -0.242599953<br>S -0.242599953 -0.242599953 -0.757400047<br>S 0.757400047 -0.242599953 0.242599953<br>K_POINTS gamma<br><br><br></td></tr></table>