[Pw_forum] PW and PHonon examples crashes in SUSE 11.1 with compiled with gfortran

eitan eidelstein eitan.eidelstein at gmail.com
Tue Dec 18 12:18:44 CET 2012


Hello,
I am using:
Linux admin 2.6.32.12-0.7-default #1 SMP 2010-05-20 11:14:20 +0200 x86_64
x86_64 x86_64 GNU/Linux
Linux version 2.6.32.12-0.7-default (geeko at buildhost) (gcc version 4.3.4
[gcc-4_3-branch revision 152973] (SUSE Linux) ) #1 SMP 2010-05-20 11:14:20
+0200
SUSE Linux Enterprise Server 11 (x86_64)
VERSION = 11
PATCHLEVEL = 1

downloaded the:
espresso-5.0.2.tar.gz

compilled with:
Using built-in specs.
Target: x86_64-suse-linux
Configured with: ../configure --prefix=/usr --infodir=/usr/share/info
--mandir=/usr/share/man --libdir=/usr/lib64 --libexecdir=/usr/lib64
--enable-languages=c,c++,objc,fortran,obj-c++,java,ada
--enable-checking=release --with-gxx-include-dir=/usr/include/c++/4.3
--enable-ssp --disable-libssp
--with-bugurl=http://bugs.opensuse.org/--with-pkgversion='SUSE Linux'
--disable-libgcj --disable-libmudflap
--with-slibdir=/lib64 --with-system-zlib --enable-__cxa_atexit
--enable-libstdcxx-allocator=new --disable-libstdcxx-pch
--enable-version-specific-runtime-libs --program-suffix=-4.3
--enable-linux-futex --without-system-libunwind --with-cpu=generic
--build=x86_64-suse-linux
Thread model: posix
gcc version 4.3.4 [gcc-4_3-branch revision 152973] (SUSE Linux)

configure output:attached
do the next warning is problematic???
configure: WARNING: using cross tools not prefixed with host triplet

make all output:attached

when running example01 in PW/:
eeitan at admin ~/QE/espresso-5.0.2/PW/examples/example01> run_example

/home/eeitan/QE/espresso-5.0.2/PW/examples/example01 : starting

This example shows how to use pw.x to calculate the total energy and
the band structure of four simple systems: Si, Al, Cu, Ni.

  executables directory: /home/eeitan/QE/espresso-5.0.2/bin
  pseudo directory:      /home/eeitan/QE/espresso-5.0.2/pseudo
  temporary directory:   /home/eeitan/tmp
  checking that needed directories and files exist... done

  running pw.x as:   /home/eeitan/QE/espresso-5.0.2/bin/pw.x  -nband 1 -ntg
1

  cleaning /home/eeitan/tmp... done
  running the scf calculation for Si... done
  running the band-structure calculation for
Si...########################################################################################################################
# FROM IOTK LIBRARY, VERSION 1.2.0
# UNRECOVERABLE ERROR (ierr=1)
# ERROR IN: iotk_scan_end (iotk_scan.f90:241)
# CVS Revision: 1.23
# foundl
# ERROR IN: iotk_close_read (iotk_files.f90:746)
# CVS Revision: 1.20
########################################################################################################################
application called MPI_Abort(MPI_COMM_WORLD, 1) - process 0
Error condition encountered during test: exit status = 1
Aborting

or running example01 in PHonon/:

eeitan at admin ~/QE/espresso-5.0.2/PHonon/examples/example01> run_example

/home/eeitan/QE/espresso-5.0.2/PHonon/examples/example01 : starting

This example shows how to use pw.x and ph.x to calculate phonon
frequencies at Gamma and X for Si and C in the diamond structure and
for fcc-Ni.

  executables directory: /home/eeitan/QE/espresso-5.0.2/bin
  pseudo directory:      /home/eeitan/QE/espresso-5.0.2/pseudo
  temporary directory:   /home/eeitan/tmp

  checking that needed directories and files exist... done

  running pw.x as:   /home/eeitan/QE/espresso-5.0.2/bin/pw.x  -nband 1 -ntg
1
  running ph.x as:   /home/eeitan/QE/espresso-5.0.2/bin/ph.x  -nband 1 -ntg
1

  cleaning /home/eeitan/tmp... done
  running the scf calculation for Si... done
  running the phonon calculation at Gamma for
Si...########################################################################################################################
# FROM IOTK LIBRARY, VERSION 1.2.0
# UNRECOVERABLE ERROR (ierr=1)
# ERROR IN: iotk_scan_end (iotk_scan.f90:241)
# CVS Revision: 1.23
# foundl
# ERROR IN: iotk_close_read (iotk_files.f90:746)
# CVS Revision: 1.20
########################################################################################################################
application called MPI_Abort(MPI_COMM_WORLD, 1) - process 0
 done
  running the phonon calculation at X for
Si...########################################################################################################################
# FROM IOTK LIBRARY, VERSION 1.2.0
# UNRECOVERABLE ERROR (ierr=1)
# ERROR IN: iotk_scan_end (iotk_scan.f90:241)
# CVS Revision: 1.23
# foundl
# ERROR IN: iotk_close_read (iotk_files.f90:746)
# CVS Revision: 1.20
########################################################################################################################
application called MPI_Abort(MPI_COMM_WORLD, 1) - process 0
Error condition encountered during test: exit status = 1
Aborting

thank in advance,
eitan.
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