[Pw_forum] error

nazari at iasbs.ac.ir nazari at iasbs.ac.ir
Tue Oct 9 14:06:37 CEST 2007



 Dear Users,

 I have tried to compile espresso on pc with linux operating system.
 I have faced with the following error in make pw step. Would you

 please let me know how I can solve this problem.

 Regards
 Fariba Nazari
 IASBS
  pwscf.o ../Modules/atom.o ../Modules/autopilot.o
../Modules/basic_algebra_routines.o ../Modules/berry_phase.o
../Modules/bfgs_module.o ../Modules/cell_base.o ../Modules/check_stop.o
../Modules/clocks.o ../Modules/constants.o
../Modules/constraints_module.o ../Modules/control_flags.o
../Modules/electrons_base.o ../Modules/fft_base.o
../Modules/fft_scalar.o ../Modules/fft_types.o ../Modules/functionals.o
../Modules/input_parameters.o ../Modules/io_files.o
../Modules/io_global.o ../Modules/ions_base.o ../Modules/ions_nose.o
../Modules/kind.o ../Modules/mp_global.o ../Modules/mp_wave.o
../Modules/mp.o ../Modules/metadyn_base.o ../Modules/metadyn_io.o
../Modules/metadyn_vars.o ../Modules/path_base.o
../Modules/path_formats.o ../Modules/path_variables.o
../Modules/path_opt_routines.o ../Modules/path_io_routines.o
../Modules/path_reparametrisation.o ../Modules/parallel_include.o
../Modules/parameters.o ../Modules/parser.o ../Modules/printout_base.o
../Modules/pseudo_types.o ../Modules/ptoolkit.o
../Modules/random_numbers.o ../Modules/read_cards.o
../Modules/read_namelists.o ../Modules/read_upf.o ../Modules/read_uspp.o
../Modules/recvec.o ../Modules/shmem_include.o ../Modules/splinelib.o
../Modules/stick_base.o ../Modules/task_groups.o ../Modules/timestep.o
../Modules/uspp.o ../Modules/version.o ../Modules/wavefunctions.o
../Modules/wave_base.o ../Modules/xml_io_base.o libpw.a ../flib/ptools.a
../flib/flib.a ../clib/clib.a ../iotk/src/libiotk.a -lmkl_lapack
-L/opt/intel/mkl/9.1.023/lib/32 -lmkl_ia32 -lguide -lpthread
/usr/local/bin/fftw-wisdom
/usr/local/bin/fftw-wisdom: In function `_start':
(.text+0x0): multiple definition of `_start'
/usr/lib/gcc/i386-redhat-linux/4.1.1/../../../crt1.o:(.text+0x0): first
defined here
/usr/local/bin/fftw-wisdom:(.rodata+0x0): multiple definition of `_fp_hw'
/usr/lib/gcc/i386-redhat-linux/4.1.1/../../../crt1.o:(.rodata+0x0): first
defined here
/usr/local/bin/fftw-wisdom: In function `_fini':
(.fini+0x0): multiple definition of `_fini'
/usr/lib/gcc/i386-redhat-linux/4.1.1/../../../crti.o:(.fini+0x0): first
defined here
/usr/local/bin/fftw-wisdom:(.rodata+0x4): multiple definition of
`_IO_stdin_used'
/usr/lib/gcc/i386-redhat-linux/4.1.1/../../../crt1.o:(.rodata.cst4+0x0):
first defined here
/usr/local/bin/fftw-wisdom: In function `__data_start':
(.data+0x0): multiple definition of `__data_start'
/usr/lib/gcc/i386-redhat-linux/4.1.1/../../../crt1.o:(.data+0x0): first
defined here
/usr/local/bin/fftw-wisdom:(.rodata+0x8): multiple definition of
`__dso_handle'
/usr/lib/gcc/i386-redhat-linux/4.1.1/crtbegin.o:(.rodata+0x0): first
defined here
/usr/local/bin/fftw-wisdom: In function `_edata':
(*ABS*+0x80d48a4): multiple definition of `__bss_start'
/usr/local/bin/fftw-wisdom: In function `_end':
(*ABS*+0x80d4af8): multiple definition of `_end'
/usr/local/bin/fftw-wisdom: In function `_edata':
(*ABS*+0x80d48a4): multiple definition of `_edata'
/usr/local/bin/fftw-wisdom: In function `_init':
(.init+0x0): multiple definition of `_init'
/usr/lib/gcc/i386-redhat-linux/4.1.1/../../../crti.o:(.init+0x0): first
defined here
../Modules/berry_phase.o: In function `__berry_phase__ln_setup':
berry_phase.f90:(.text+0x33): undefined reference to `ln_alloc_'
berry_phase.f90:(.text+0x92): undefined reference to `ln_set_'
berry_phase.f90:(.text+0xa5): undefined reference to `ln_activate_'
../Modules/berry_phase.o: In function `__berry_phase__indi_of_ig':
berry_phase.f90:(.text+0x21e): undefined reference to `ln_ind_'
berry_phase.f90:(.text+0x250): undefined reference to `ln_ind_'
berry_phase.f90:(.text+0x286): undefined reference to `ln_ind_'
berry_phase.f90:(.text+0x30c): undefined reference to `ln_ind_'
berry_phase.f90:(.text+0x335): undefined reference to `ln_ind_'
../Modules/berry_phase.o:berry_phase.f90:(.text+0x379): more undefined
references to `ln_ind_' follow
../Modules/berry_phase.o: In function `__berry_phase__ln_closeup':
berry_phase.f90:(.text+0xe2): undefined reference to `ln_dealloc_'
../Modules/fft_scalar.o: In function `__fft_scalar__cft_1z':
fft_scalar.f90:(.text+0xf2): undefined reference to `create_plan_1d_'
fft_scalar.f90:(.text+0x118): undefined reference to `create_plan_1d_'
fft_scalar.f90:(.text+0x1f0): undefined reference to `fft_z_stick_'
fft_scalar.f90:(.text+0x258): undefined reference to `destroy_plan_1d_'
fft_scalar.f90:(.text+0x26c): undefined reference to `destroy_plan_1d_'
fft_scalar.f90:(.text+0x295): undefined reference to `fft_z_stick_'
../Modules/fft_scalar.o: In function `__fft_scalar__cft_2xy':
fft_scalar.f90:(.text+0x49c): undefined reference to `create_plan_1d_'
fft_scalar.f90:(.text+0x4c2): undefined reference to `create_plan_1d_'
fft_scalar.f90:(.text+0x516): undefined reference to `create_plan_1d_'
fft_scalar.f90:(.text+0x53c): undefined reference to `create_plan_1d_'
fft_scalar.f90:(.text+0x633): undefined reference to `fft_x_stick_'
fft_scalar.f90:(.text+0x6cb): undefined reference to `destroy_plan_1d_'
fft_scalar.f90:(.text+0x6df): undefined reference to `destroy_plan_1d_'
fft_scalar.f90:(.text+0x6f3): undefined reference to `destroy_plan_1d_'
fft_scalar.f90:(.text+0x707): undefined reference to `destroy_plan_1d_'
fft_scalar.f90:(.text+0x785): undefined reference to `fft_x_stick_'
fft_scalar.f90:(.text+0x86e): undefined reference to `fft_y_stick_'
fft_scalar.f90:(.text+0x8d3): undefined reference to `fft_y_stick_'
../Modules/fft_scalar.o: In function `__fft_scalar__cfft3d':
fft_scalar.f90:(.text+0x9c2): undefined reference to `create_plan_3d_'
fft_scalar.f90:(.text+0x9f0): undefined reference to `create_plan_3d_'
fft_scalar.f90:(.text+0xa7a): undefined reference to `fftw_inplace_drv_3d_'
fft_scalar.f90:(.text+0xab0): undefined reference to `destroy_plan_3d_'
fft_scalar.f90:(.text+0xacb): undefined reference to `destroy_plan_3d_'
fft_scalar.f90:(.text+0xb7a): undefined reference to `fftw_inplace_drv_3d_'
../Modules/fft_scalar.o: In function `__fft_scalar__cfft3ds':
fft_scalar.f90:(.text+0xd1c): undefined reference to `create_plan_1d_'
fft_scalar.f90:(.text+0xd45): undefined reference to `create_plan_1d_'
fft_scalar.f90:(.text+0xd6e): undefined reference to `create_plan_1d_'
fft_scalar.f90:(.text+0xd97): undefined reference to `create_plan_1d_'
fft_scalar.f90:(.text+0xdc0): undefined reference to `create_plan_1d_'
../Modules/fft_scalar.o:fft_scalar.f90:(.text+0xde9): more undefined
references to `create_plan_1d_' follow
../Modules/fft_scalar.o: In function `__fft_scalar__cfft3ds':
fft_scalar.f90:(.text+0xee1): undefined reference to `fftw_inplace_drv_1d_'
fft_scalar.f90:(.text+0xfa9): undefined reference to `fftw_inplace_drv_1d_'
fft_scalar.f90:(.text+0xfe7): undefined reference to `fftw_inplace_drv_1d_'
fft_scalar.f90:(.text+0x1025): undefined reference to `destroy_plan_1d_'
fft_scalar.f90:(.text+0x104c): undefined reference to `destroy_plan_1d_'
fft_scalar.f90:(.text+0x1073): undefined reference to `destroy_plan_1d_'
fft_scalar.f90:(.text+0x109a): undefined reference to `destroy_plan_1d_'
fft_scalar.f90:(.text+0x10c1): undefined reference to `destroy_plan_1d_'
../Modules/fft_scalar.o:fft_scalar.f90:(.text+0x10e8): more undefined
references to `destroy_plan_1d_' follow
../Modules/fft_scalar.o: In function `__fft_scalar__cfft3ds':
fft_scalar.f90:(.text+0x11dd): undefined reference to `fftw_inplace_drv_1d_'
fft_scalar.f90:(.text+0x126a): undefined reference to `fftw_inplace_drv_1d_'
fft_scalar.f90:(.text+0x1317): undefined reference to `fftw_inplace_drv_1d_'
../Modules/fft_scalar.o: In function `__fft_scalar__cft_b':
fft_scalar.f90:(.text+0x148e): undefined reference to `create_plan_1d_'
fft_scalar.f90:(.text+0x14cf): undefined reference to `create_plan_2d_'
fft_scalar.f90:(.text+0x1574): undefined reference to `fftw_inplace_drv_1d_'
fft_scalar.f90:(.text+0x15b6): undefined reference to `fftw_inplace_drv_2d_'
fft_scalar.f90:(.text+0x15db): undefined reference to `destroy_plan_1d_'
fft_scalar.f90:(.text+0x15ef): undefined reference to `destroy_plan_2d_'
../Modules/xml_io_base.o: In function `__xml_io_base__create_directory':
xml_io_base.f90:(.text+0x20a): undefined reference to `c_mkdir_'
libpw.a(input.o): In function `verify_tmpdir_':
input.f90:(.text+0x60a): undefined reference to `c_mkdir_'
libpw.a(bp_c_phase.o): In function `c_phase_':
bp_c_phase.f90:(.text+0x103a): undefined reference to `ylm_q_'
libpw.a(bp_radin.o): In function `radlg_':
bp_radin.f:(.text+0x17a): undefined reference to `s_wsle'
bp_radin.f:(.text+0x190): undefined reference to `do_lio'
bp_radin.f:(.text+0x198): undefined reference to `e_wsle'
bp_radin.f:(.text+0x1a5): undefined reference to `s_wsle'
bp_radin.f:(.text+0x1bb): undefined reference to `do_lio'
bp_radin.f:(.text+0x1d0): undefined reference to `do_lio'
bp_radin.f:(.text+0x1d5): undefined reference to `e_wsle'
bp_radin.f:(.text+0x1e3): undefined reference to `s_stop'
libpw.a(bp_radin.o): In function `radlg1_':
bp_radin.f:(.text+0x2b5): undefined reference to `s_wsle'
bp_radin.f:(.text+0x2cb): undefined reference to `do_lio'
bp_radin.f:(.text+0x2d3): undefined reference to `e_wsle'
bp_radin.f:(.text+0x2e0): undefined reference to `s_wsle'
bp_radin.f:(.text+0x2f6): undefined reference to `do_lio'
bp_radin.f:(.text+0x30b): undefined reference to `do_lio'
bp_radin.f:(.text+0x310): undefined reference to `e_wsle'
bp_radin.f:(.text+0x31e): undefined reference to `s_stop'
libpw.a(c_phase_field.o): In function `c_phase_field_':
c_phase_field.f90:(.text+0x2008): undefined reference to `ylm_q_'
libpw.a(h_epsi_her.o): In function `h_epsi_her_':
h_epsi_her.f90:(.text+0xd9e): undefined reference to `ylm_q_'
h_epsi_her.f90:(.text+0x1292): undefined reference to `ylm_q_'
collect2: ld returned 1 exit status
make[1]: *** [pw.x] Error 1
make[1]: Leaving directory `/root/fariba/espresso-3.2.3/PW'
make: *** [pw] Error 2





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